Evidence map›Paper›PMID 26605136›Full record

ArticleFEBS open bio2015

Murine erythroid 5-aminolevulinate synthase: Adenosyl-binding site Lys221 modulates substrate binding and catalysis.

Bosko M Stojanovski, Gloria C Ferreira

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Bosko M StojanovskiDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL 33612, United States.
Gloria C FerreiraDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL 33612, United States ; Department of Chemistry, University of South Florida, Tampa, FL 33612, United States.
University of South Florida · US

Funding

Ferrochelatase: dose porphyrin distortion control metal ion specificity?R01GM080270 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI FERREIRA, GLORIA C. · 2007 to 2010
$916k
NIGMS NIH HHS R01 GM080270
6 · The paper itself

Abstract

5-Aminolevulinate synthase (ALAS) catalyzes the initial step of mammalian heme biosynthesis, the condensation between glycine and succinyl-CoA to produce CoA, CO2, and 5-aminolevulinate. The crystal structure of Rhodobacter capsulatus ALAS indicates that the adenosyl moiety of succinyl-CoA is positioned in a mainly hydrophobic pocket, where the ribose group forms a putative hydrogen bond with Lys156. Loss-of-function mutations in the analogous lysine of human erythroid ALAS (ALAS2) cause X-linked sideroblastic anemia. To characterize the contribution of this residue toward catalysis, the equivalent lysine in murine ALAS2 was substituted with valine, eliminating the possibility of a hydrogen bond. The K221V substitution produced a 23-fold increase in the [Formula: see text] and a 97% decrease in [Formula: see text]. This reduction in the specificity constant does not stem from lower affinity toward succinyl-CoA, since the [Formula: see text] of K221V is lower than that of wild-type ALAS. For both enzymes, the [Formula: see text] value is significantly different from the [Formula: see text]. That K221V has stronger binding affinity for succinyl-CoA was further deduced from substrate protection studies, as K221V achieved maximal protection at lower succinyl-CoA concentration than wild-type ALAS. Moreover, it is the CoA, rather than the succinyl moiety, that facilitates binding of succinyl-CoA to wild-type ALAS, as evident from identical [Formula: see text] and [Formula: see text] values. Transient kinetic analyses of the K221V-catalyzed reaction revealed that the mutation reduced the rates of quinonoid intermediate II formation and decay. Altogether, the results imply that the adenosyl-binding site Lys221 contributes to binding and orientation of succinyl-CoA for effective catalysis.

Indexed as

5-Aminolevulinate synthaseALA, 5-aminolevulinic acidALAS2, erythroid specific isoform of 5-aminolevulinate synthaseEnzymatic mechanismHememALAS2, erythroid specific isoform of murine 5-aminolevulinate synthasePLP, pyridoxal 5′-phosphatePorphyriaPyridoxal phosphateSDS–PAGE, sodium dodecyl sulfate polyacrylamide gel electrophoresisSideroblastic anemiaXLPP, X-linked protoporphyriaXLSA, X-linked sideroblastic anemia

Identifiers

PMID26605136
PMCPMC4615937
OpenAlexW1867350716

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.