ArticleInternational journal of molecular sciences2015
Transcriptome Profiling of Louisiana iris Root and Identification of Genes Involved in Lead-Stress Response.
Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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Who cites it
10 citing papers in PubMed.
- Integrated Transcriptomics and Metabolomics Studies Reveal Steroid Biosynthesis Pathway and BCL2 Inhibitory Diazo-progesterone ofCurrent pharmaceutical biotechnology · 2025Article
- Pb uptake, accumulation, and translocation in plants: Plant physiological, biochemical, and molecular response: A review.Heliyon · 2024Review
- Hybrid RNA Sequencing Strategy for the Dynamic Transcriptomes of Winter Dormancy in an Evergreen Herbaceous Perennial,Frontiers in genetics · 2022Article
- Evaluation of drought resistance and transcriptome analysis for the identification of drought-responsive genes in Iris germanica.Scientific reports · 2021Article
- Transcriptome profiling of Fagopyrum tataricum leaves in response to lead stress.BMC plant biology · 2020Article
- Transcriptome-Wide Identification of Differentially Expressed Genes and Long Non-coding RNAs in Aluminum-Treated Rat Hippocampus.Neurotoxicity research · 2018Article
- Transcriptome assembly and expression profiling of the molecular responses to cadmium toxicity in cerebral ganglia of wolf spider Pardosa pseudoannulata (Araneae: Lycosidae).Ecotoxicology (London, England) · 2018Article
- De Novo Assembly, Annotation, and Characterization of Root Transcriptomes of Three Caladium Cultivars with a Focus on Necrotrophic Pathogen Resistance/Defense-Related Genes.International journal of molecular sciences · 2017Article
- Transcriptomic and physiological analyses of Medicago sativa L. roots in response to lead stress.PloS one · 2017Article
- Transcriptome Profiling Analysis of Wolf Spider Pardosa pseudoannulata (Araneae: Lycosidae) after Cadmium Exposure.International journal of molecular sciences · 2016Article
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Authors and funding
6 authors.
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Abstract
Louisiana iris is tolerant to and accumulates the heavy metal lead (Pb). However, there is limited knowledge of the molecular mechanisms behind this feature. We describe the transcriptome of Louisiana iris using Illumina sequencing technology. The root transcriptome of Louisiana iris under control and Pb-stress conditions was sequenced. Overall, 525,498 transcripts representing 313,958 unigenes were assembled using the clean raw reads. Among them, 43,015 unigenes were annotated and their functions classified using the euKaryotic Orthologous Groups (KOG) database. They were divided into 25 molecular families. In the Gene Ontology (GO) database, 50,174 unigenes were categorized into three GO trees (molecular function, cellular component and biological process). After analysis of differentially expressed genes, some Pb-stress-related genes were selected, including biosynthesis genes of chelating compounds, metal transporters, transcription factors and antioxidant-related genes. This study not only lays a foundation for further studies on differential genes under Pb stress, but also facilitates the molecular breeding of Louisiana iris.
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