Evidence map›Paper›PMID 26602749›Full record

ArticleClinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology2016

Serological, genomic and structural analyses of the major mite allergen Der p 23.

G A Mueller, T A Randall, J Glesner, L C Pedersen, L Perera, L L Edwards, E F DeRose, M D Chapman, R E London, A Pomés

Abstract read
In one paragraph

Article in Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 88 citations in OpenAlex.

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  13. [Profiles of IgE sensitization to dust mite allergen components in patients with allergic rhinitis and asthma].Lin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

G A MuellerGenome Integrity and Structural Biology Laboratory, Research Triangle Park, NC, USA.
T A RandallIntegrative Bioinformatics, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.
J GlesnerINDOOR Biotechnologies, Inc., Charlottesville, VA, USA.
L C PedersenGenome Integrity and Structural Biology Laboratory, Research Triangle Park, NC, USA.
L PereraGenome Integrity and Structural Biology Laboratory, Research Triangle Park, NC, USA.
L L EdwardsGenome Integrity and Structural Biology Laboratory, Research Triangle Park, NC, USA.
E F DeRoseGenome Integrity and Structural Biology Laboratory, Research Triangle Park, NC, USA.
M D ChapmanINDOOR Biotechnologies, Inc., Charlottesville, VA, USA.
R E LondonGenome Integrity and Structural Biology Laboratory, Research Triangle Park, NC, USA.
A PomésINDOOR Biotechnologies, Inc., Charlottesville, VA, USA.
Triangle · USIndoor Biotechnologies (United States) · USNational Institutes of Health · US

Funding

Structural and Functional Characterization of AllergensZIAES102906 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI MUELLER, GEOFFREY · 2010 to 2025
$10.0M
Antigenic determinants of asthma-associated allergens for design of immunotherapy.R01AI077653 · NIAID · INDOOR BIOTECHNOLOGIES · PI MARTIN D. CHAPMAN, Maksymilian Chruszcz · 2009 to 2026
$9.5M
Crystallographic studies of macromolecular structuresZIAES102645 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI PEDERSEN, LARS · 2009 to 2017
$9.4M
Macromolecular ModelingZICES043010 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI COPELAND, WILLIAM · 2012 to 2025
$5.7M
Intramural NIH HHS ZIA ES102645Intramural NIH HHS ZIA ES102906NIAID NIH HHS R01 AI077653NIAID NIH HHS R01AI077653NIEHS NIH HHS Z01-ES102885-01NIEHS NIH HHS ZIA-ES102645
6 · The paper itself

Abstract

backgroundDer p 23 was recently identified in a European population as a major allergen and potentially a chitin binding protein.

objectiveThis study sought to assess the importance of Der p 23 among other Dermatophagoides allergens in a North American population and to determine the structure for functional characterization.

methodsIgE binding to Der p 23, Der p 1, Der p 2, Der p 5, Der p 7 and Der p 8 was measured by ELISA. RNA-seq data from D. pteronyssinus were compared as estimates of allergen expression levels. The structure was analysed by X-ray crystallography and NMR.

resultsDespite a high prevalence of Der p 23, (75% vs. 87% and 79% for Der p 1 and Der p 2, respectively), the anti-Der p 23 IgE levels were relatively low. The patient response to the 6 allergens tested was variable (n = 47), but on average anti-Der p 1 and anti-Der p 2 together accounted for 85% of the specific IgE. In terms of abundance, the RNA expression level of Der p 23 is the lowest of the major allergens, thirty fold less than Der p 1 and sevenfold less than Der p 2. The structure of Der p 23 is a small, globular protein stabilized by two disulphide bonds, which is structurally related to allergens such as Blo t 12 that contain carbohydrate binding domains that bind chitin. Functional assays failed to confirm chitin binding by Der p 23. CONCLUSIONS AND CLINICAL RELEVANCE: Der p 23 accounts for a small percentage of the IgE response to mite allergens, which is dominated by Der p 1 and Der p 2. The prevalence and amount of specific IgE to Der p 23 and Der p 2 are disproportionately high compared to the expression of other Dermatophagoides allergens.

Indexed as

AllergensAmino Acid SequenceAnimalsAntigens, DermatophagoidesCrystallography, X-RayEnzyme-Linked Immunosorbent AssayGenomicsHumansHypersensitivityImmunoglobulin EModels, MolecularMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularProtein ConformationAllergensAntigens, DermatophagoidesImmunoglobulin EallergenDer p 23house dust miteRNA-seq

Identifiers

PMID26602749
PMCPMC4732897
OpenAlexW2174027647

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.