Evidence map›Paper›PMID 26602233›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2016

TaXA21-A1 on chromosome 5AL is associated with resistance to multiple pests in wheat.

Meiyan Liu, Lei Lei, Carol Powers, Zhiyong Liu, Kimberly G Campbell, Xianming Chen, Robert L Bowden, Brett F Carver, Liuling Yan

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Meiyan LiuDepartment of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.
Lei LeiDepartment of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.
Carol PowersDepartment of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.
Zhiyong LiuDepartment of Plant Genetics and Breeding, China Agricultural University, Beijing, 100193, China.
Kimberly G CampbellWheat Genetics, Quality, Physiology, and Disease Research Unit, USDA-ARS, Pullman, WA, 99164, USA.
Xianming ChenWheat Genetics, Quality, Physiology, and Disease Research Unit, USDA-ARS, Pullman, WA, 99164, USA.
Robert L BowdenHard Winter Wheat Genetics Research Unit, USDA-ARS, Manhattan, KS, 66506, USA.
Brett F CarverDepartment of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA.
Liuling YanDepartment of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK, 74074, USA. liuling.yan@okstate.edu.
Oklahoma State University · USWashington State University · USCenter for Grain and Animal Health Research · USChina Agricultural University · CNJiangsu Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageThe wheat ortholog of the rice gene OsXA21 against bacterial leaf blight showed resistance to multiple pests in bread wheat but different interacting proteins. ABSTRACT: A quantitative trait locus QYr.osu-5A on the long arm of chromosome 5A in bread wheat (Triticum aestivum L., 2n = 6x = 42; AABBDD) was previously reported to confer consistent resistance in adult plants to predominant stripe rust races, but the gene causing the quantitative trait locus (QTL) is not known. Single-nucleotide polymorphism (SNP) markers were used to saturate the QTL region. Comparative and syntenic regions between wheat and rice (Oryza sativa) were applied to identify candidate genes for QYr.osu-5A. TaXA21-A1, which is referred to as a wheat ortholog of OsXA21-like gene on chromosome 9 in rice, was mapped under the peak of the QYr.osu-5A. TaXA21-A1 not only explained the phenotypic variation in reaction to different stripe rust races but also showed significant effects on resistance to powdery mildew and Hessian fly biotype BP. The natural allelic variation resulted in the alternations of four amino acids in deduced TaXA21-A1 proteins. The interacting proteins of TaXA21-A1 were different from those identified by OsXA21 on rice chromosome 11 against bacterial leaf blight. TaXA21-A1 confers unique resistance against multiple pests in wheat but might not have common protein interactors or thus overlapping functions with OsXA21 in rice. XA21 function has diverged during evolution of cereal crops. The molecular marker developed for TaXA21-A1 would accelerate its application of the candidate gene at the QYr.osu-5A locus in wheat breeding programs.

Indexed as

Quantitative Trait LociAmino Acid SequenceAnimalsBacteriaBasidiomycotaChromosomes, PlantChromosome WalkingCrops, AgriculturalDipteraDisease ResistanceGenes, PlantGenetic MarkersGenetic VariationMolecular Sequence DataOryzaPlant DiseasesGenetic Markers

Identifiers

PMID26602233
OpenAlexW2173504696

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.