Evidence map›Paper›PMID 26602024›Full record

ArticleScientific reports2015

Polymorphisms near the IFNL3 Gene Associated with HCV RNA Spontaneous Clearance and Hepatocellular Carcinoma Risk.

Mei-Hsuan Lee, Hwai-I Yang, Sheng-Nan Lu, Yu-Ju Lin, Chin-Lan Jen, Kang-Hsuan Wong, Soa-Yu Chan, Liang-Chun Chen, Li-Yu Wang, Gilbert L'Italien and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Virusdisease · 2019
    Article
  7. Article
  8. Association ofClinical and experimental gastroenterology · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Prevalence ofWorld journal of gastroenterology · 2017
    Article
  13. Article
  14. Systems Challenges of Hepatic Carcinomas: A Review.Journal of clinical and experimental hepatology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 8 institutions in 2 countries.

Mei-Hsuan LeeInstitute of Clinical Medicine, National Yang-Ming University, Taipei, Taiwan.
Hwai-I YangGenomics Research Center, Academia Sinica, Taipei, Taiwan.
Sheng-Nan LuDivision of Hepato-Gastroenterology, (Department of Internal Medicine), Kaohsiung Chang Gung Memorial Hospital, KaohsiungChang Gung University School of Medicine, Kaohsiung, Taiwan.
Yu-Ju LinGenomics Research Center, Academia Sinica, Taipei, Taiwan.
Chin-Lan JenGenomics Research Center, Academia Sinica, Taipei, Taiwan.
Kang-Hsuan WongInstitute of Clinical Medicine, National Yang-Ming University, Taipei, Taiwan.
Soa-Yu ChanInstitute of Clinical Medicine, National Yang-Ming University, Taipei, Taiwan.
Liang-Chun ChenFaculty of Medicine, National Yang-Ming University, Taipei, Taiwan.
Li-Yu WangMacKay Medical College, Taipei, Taiwan.
Gilbert L'ItalienGlobal Health Economics and Outcomes Research, Bristol-Myers Squibb, Princeton, NJ, United States.
Yong YuanGlobal Health Economics and Outcomes Research, Bristol-Myers Squibb, Princeton, NJ, United States.
Chien-Jen ChenGenomics Research Center, Academia Sinica, Taipei, Taiwan.
Genomics Research Center, Academia Sinica · TWNational Yang Ming Chiao Tung University · TWBristol-Myers Squibb (United States) · USKaohsiung Chang Gung Memorial Hospital · TWMackay Medical College · TWNational Yang Ming Chiao Tung University · TWNational Yang Ming University Hospital · TWYale University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aims of this study were to investigate associations between single nucleotide polymorphisms (SNPs) near the genes IFNL2, IFNL3, and IFNL4 and spontaneous clearance of hepatitis C virus (HCV) and to evaluate variants for their risk of hepatocellular carcinoma (HCC) among subjects in whom spontaneous HCV RNA clearance did not occur. In the first study, 889 untreated anti-HCV-seropositive patients without HCC symptoms were followed from 1991 to 2005. The spontaneous HCV clearance rate was found to be 33.1%. The TT variant of rs8099917 near IFNL3 was associated with increased spontaneous HCV RNA clearance, with an adjusted odds ratio (95% CI) of 2.78 (1.43-5.39), as was the newly-identified TT/TT dinucleotide variant rs368234815 near IFNL4 (adjusted odds ratio 2.68, 95% CI: 1.42-5.05). In the second study, associations between SNPs and HCC risk were examined in 483 HCC cases with detectable HCV RNA and 516 controls. In participants with HCV genotype 1, unfavorable genotypes for HCV clearance near IFNL3 were associated with increased HCC risk, the adjusted odds ratio (95% CI) for rs12979860 and rs8099917 being 1.73 (1.00-2.99) and 1.84 (1.02-3.33), respectively. Host characteristics should be considered to identify high-risk patients to prioritize the use of new antiviral agents and intensive screening.

Indexed as

AdultAllelesCarcinoma, HepatocellularCase-Control StudiesFemaleGenotypeHepacivirusHumansInterferon LambdaInterferonsInterleukinsLinkage DisequilibriumLiver NeoplasmsMaleMiddle AgedOdds RatioIFNL4 protein, humanInterferon Lambdainterferon-lambda, humanInterferonsInterleukinsRNA, Viral

Identifiers

PMID26602024
PMCPMC4658500
OpenAlexW2409689149

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.