Evidence map›Paper›PMID 26601054›Full record

ArticleCancer treatment communications

Experience with targeted next generation sequencing for the care of lung cancer: insights into promises and limitations of genomic oncology in day-to-day practice.

Deepa Rangachari, Paul A VanderLaan, Xiuning Le, Erik Folch, Michael S Kent, Sidharta P Gangadharan, Adnan Majid, Richard L Haspel, Loren J Joseph, Mark S Huberman and 1 more

Open access · greenAbstract read
In one paragraph

Article in Cancer treatment communications. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Observational
  4. Article
  5. Article
  6. Article
  7. Correlation between Classic Driver Oncogene Mutations in EGFR, ALK, or ROS1 and 22C3-PD-L1 ≥50% Expression in Lung Adenocarcinoma.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2017
    Article
  8. Article
  9. Article
  10. Article
  11. Tumor Heterogeneity, Single-Cell Sequencing, and Drug Resistance.Pharmaceuticals (Basel, Switzerland) · 2016
    Review
  12. Pulse Afatinib for ERBB2 Exon 20 Insertion-Mutated Lung Adenocarcinomas.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2016
    Article
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Deepa RangachariDepartment of Medicine, 330 Brookline Avenue, Boston, MA 02215, USA.
Paul A VanderLaanDepartment of Pathology, 330 Brookline Avenue, Boston, MA 02215, USA.
Xiuning LeDepartment of Medicine, 330 Brookline Avenue, Boston, MA 02215, USA.
Erik FolchDepartment of Medicine, 330 Brookline Avenue, Boston, MA 02215, USA ; Department of Surgery, 330 Brookline Avenue, Boston, MA 02215, USA; all at Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Michael S KentDepartment of Surgery, 330 Brookline Avenue, Boston, MA 02215, USA; all at Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Sidharta P GangadharanDepartment of Surgery, 330 Brookline Avenue, Boston, MA 02215, USA; all at Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Adnan MajidDepartment of Medicine, 330 Brookline Avenue, Boston, MA 02215, USA ; Department of Surgery, 330 Brookline Avenue, Boston, MA 02215, USA; all at Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Richard L HaspelDepartment of Pathology, 330 Brookline Avenue, Boston, MA 02215, USA.
Loren J JosephDepartment of Pathology, 330 Brookline Avenue, Boston, MA 02215, USA.
Mark S HubermanDepartment of Medicine, 330 Brookline Avenue, Boston, MA 02215, USA.
Daniel B CostaDepartment of Medicine, 330 Brookline Avenue, Boston, MA 02215, USA.
Beth Israel Deaconess Medical Center · USHarvard University · US

Funding

Translational studies of Hsp90 inhibitors in NSCLCP50CA090578 · NCI · DANA-FARBER CANCER INST · PI YEAP, BEOW Y · 2008 to 2012
$11.4M
SPORE in Lung CancerP20CA090578 · NCI · DANA-FARBER CANCER INSTITUTE · PI JOHNSON, BRUCE E. · 2003 to 2007
$5.1M
NCI NIH HHS P20 CA090578NCI NIH HHS P50 CA090578
6 · The paper itself

Abstract

introductionTumor genotyping using single gene assays (SGAs) is standard practice in advanced non-small-cell lung cancer (NSCLC). We evaluated how the introduction of next generation sequencing (NGS) into day-to-day clinical practice altered therapeutic decision-making.

methodsClinicopathologic data, tumor genotype, and clinical decisions were retrospectively compiled over 6 months following introduction of NGS assay use at our institution in 82 patient-tumor samples (7 by primary NGS, 22 by sequential SGAs followed by NGS, and 53 by SGAs).

resultsSGAs identified abnormalities in 34 samples, and all patients with advanced

conclusionsTargeted NGS can identify a significant number of therapeutically-relevant driver events in lung ACs; particularly in never or light smokers. For SC lung cancers, NGS is less likely to alter current practice. Further research into the cost effectiveness and optimal use of NGS and improved provider training in genomic oncology are warranted.

Indexed as

adenocarcinomaALKdriver oncogeneEGFRgenotypeMETnext generation sequencingNon-small-cell lung cancerROS1squamous cell carcinomas

Identifiers

PMID26601054
PMCPMC4653729
OpenAlexW2097428088

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.