Evidence map›Paper›PMID 26600676›Full record

ArticlePhysiology and molecular biology of plants : an international journal of functional plant biology2015

Identification of key genes involved in root development of tomato using expressed sequence tag analysis.

N Kalidhasan, Deepti Joshi, Tarun Kumar Bhatt, Aditya Kumar Gupta

Abstract read
In one paragraph

Article in Physiology and molecular biology of plants : an international journal of functional plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Overexpression ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

N KalidhasanDepartment of Plant Biotechnology, School of Biotechnology, Madurai Kamaraj University, Madurai, 625021 India.
Deepti JoshiDepartment of Biotechnology, School of LifeSciences, Central University of Rajasthan, Bandarsindri, 305801 India.
Tarun Kumar BhattDepartment of Biotechnology, School of LifeSciences, Central University of Rajasthan, Bandarsindri, 305801 India.
Aditya Kumar GuptaDepartment of Plant Biotechnology, School of Biotechnology, Madurai Kamaraj University, Madurai, 625021 India ; Department of Biotechnology, School of LifeSciences, Central University of Rajasthan, Bandarsindri, 305801 India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Root system of plants are actually fascinating structures, not only critical for plant development, but also important for storage and conduction. Due to its agronomic importance, identification of genes involved in root development has been a subject of intense study. Tomato is the one of the most consumed vegetables in the world. Tomato has been used as model system for dicot plants because of its small genome, well-established transformation techniques and well-constructed physical map. The present study is targeted to identify of root specific genes expressed temporally and also gene(s) involved in lateral root and profuse root development. A total of 890 ESTs were identified from five EST libraries constructed using SSH approach which included temporal gene regulation (early and late) and genes involved in morphogenetic traits (lateral and profuse rooting). One hundred sixty-one unique ESTs identified from various libraries were categorized based on their putative functions and deposited in NCBI-dbEST database. In addition, 36 ESTs were selected for validation of their expression by RT-PCR. The present findings will help in shedding light to the unexplored developmental process of root growth in tomato and plant in general.

Indexed as

EST LibraryRoot developmentRoot elongationStress related genesTomato

Identifiers

PMID26600676
PMCPMC4646861

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.