ArticlePloS one2015
Transcriptome Analysis of Short Fiber Mutant Ligon lintless-1 (Li1) Reveals Critical Genes and Key Pathways in Cotton Fiber Elongation and Leaf Development.
Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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19 citing papers in PubMed, 34 citations in OpenAlex.
- The Disruptions of Sphingolipid and Sterol Metabolism in the Short Fiber ofInternational journal of molecular sciences · 2025Article
- Genome-Wide and Expression Pattern Analysis of the DVL Gene Family RevealsInternational journal of molecular sciences · 2024Article
- Leveraging transcriptomics-based approaches to enhance genomic prediction: integrating SNPs and gene networks for cotton fibre quality improvement.Frontiers in plant science · 2024Article
- Cotton pedigree genome reveals restriction of cultivar-driven strategy in cotton breeding.Genome biology · 2023Article
- Transcriptome, Ectopic Expression and Genetic Population Analysis Identify Candidate Genes for Fiber Quality Improvement in Cotton.International journal of molecular sciences · 2023Article
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- A cotton α1,3-/4-fucosyltransferase-encoding gene, FucT4, plays an important role in cell elongation and is significantly associated with fiber quality.Molecular genetics and genomics : MGG · 2020Article
- An EMS-induced mutation in a tetratricopeptide repeat-like superfamily protein gene (Ghir_A12G008870) on chromosome A12 is responsible for the liTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020Article
- Comparative Proteomic Analysis of Molecular Differences between Leaves of Wild-Type Upland Cotton and ItsMolecules (Basel, Switzerland) · 2019Article
- Long non-coding RNAs and their potential functions in Ligon-lintless-1 mutant cotton during fiber development.BMC genomics · 2019Article
- Fine mapping and identification of the fuzzless gene GaFzl in DPL972 (Gossypium arboreum).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019Article
- Comparative transcriptome analysis of TUCPs in Gossypium hirsutum Ligon-lintless-1 mutant and their proposed functions in cotton fiber development.Molecular genetics and genomics : MGG · 2019Article
- G65V Substitution in Actin Disturbs Polymerization Leading to Inhibited Cell Elongation in Cotton.Frontiers in plant science · 2019Article
- Transcriptome Analysis Suggests That Chromosome Introgression Fragments from Sea Island Cotton (G3 (Bethesda, Md.) · 2017Article
- Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum.BMC genetics · 2016Article
- Comparative Proteomic Analysis of Cotton Fiber Development and Protein Extraction Method Comparison in Late Stage Fibers.Proteomes · 2016Article
Corrections and comments
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
For efficient spinning and superior fabric production, long fiber length is a desired trait for cotton production. To unveil the molecular basis of the cotton fiber length regulation, a short fiber mutant, Ligon lintless-1 (Li1), is selected to compare with its corresponding wild type (WT). Li1 is a monogenic dominant cotton mutant causing extremely short fibers (<6mm) on mature seeds with visible pleiotropic effects on vegetative growth and development. In this research, we compared the transcriptome of fiber bearing ovules at 1 DPA, 3 DPA, 8 DPA and leaf between Li1 mutant and WT. A total of 7,852 differentially expressed genes (DEGs) were detected in ovules and leaves, which mainly participated in sugar, secondary metabolite and lipid metabolism pathways based on KEGG analysis. The common DEGs at 1 DPA and 3 DPA were involved in the responses to endogenous stimulus, signal transduction and long-chain fatty acid biosynthesis. For 3 DPA, 8 DPA and leaf, the common DEGs were involved in the responses to auxin and receptor kinases related pathway. Further analysis showed that 37 genes involved in very-long-chain fatty acid biosynthesis were suppressed in Li1 mutant during fiber fast elongation development. Most of the DEGs involved in cell wall metabolism, such cellulose synthase, expansin family, and glycosyl hydrolase were differentially expressed at 3 DPA and 8 DPA. Our results provide new insights into the mechanisms of fiber elongation, and offer novel genes as potential objects for fiber length improvement.
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