Evidence map›Paper›PMID 26599366›Full record

ArticleScientific reports2015

First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90.

Swetha Raman, Meetali Singh, Utpal Tatu, Kaza Suguna

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Swetha RamanMolecular Biophysics Unit, Indian Institute of Science, Bangalore, India.
Meetali SinghDepartment of Biochemistry, Indian Institute of Science, Bangalore, India.
Utpal TatuDepartment of Biochemistry, Indian Institute of Science, Bangalore, India.
Kaza SugunaMolecular Biophysics Unit, Indian Institute of Science, Bangalore, India.
Indian Institute of Science Bangalore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The involvement of Hsp90 in progression of diseases like cancer, neurological disorders and several pathogen related conditions is well established. Hsp90, therefore, has emerged as an attractive drug target for many of these diseases. Several small molecule inhibitors of Hsp90, such as geldanamycin derivatives, that display antitumor activity, have been developed and are under clinical trials. However, none of these tested inhibitors or drugs are peptide-based compounds. Here we report the first crystal structure of a peptide bound at the ATP binding site of the N-terminal domain of Hsp90. The peptide makes several specific interactions with the binding site residues, which are comparable to those made by the nucleotide and geldanamycin. A modified peptide was designed based on these interactions. Inhibition of ATPase activity of Hsp90 was observed in the presence of the modified peptide. This study provides an alternative approach and a lead peptide molecule for the rational design of effective inhibitors of Hsp90 function.

Indexed as

Amino Acid SequenceBenzoquinonesBinding SitesCrystallography, X-RayHSP90 Heat-Shock ProteinsHumansLactams, MacrocyclicMolecular Dynamics SimulationNucleotidesPeptidesProtein BindingProtein Interaction Domains and MotifsProtein Structure, TertiaryRecombinant ProteinsBenzoquinonesgeldanamycinHSP90 Heat-Shock ProteinsLactams, MacrocyclicNucleotidesPeptidesRecombinant Proteins

Identifiers

PMID26599366
PMCPMC4657054
OpenAlexW2293135833

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.