Evidence map›Paper›PMID 26598971›Full record

ArticlePloS one2015

Functional Inactivation of Putative Photosynthetic Electron Acceptor Ferredoxin C2 (FdC2) Induces Delayed Heading Date and Decreased Photosynthetic Rate in Rice.

Juan Zhao, Zhennan Qiu, Banpu Ruan, Shujing Kang, Lei He, Sen Zhang, Guojun Dong, Jiang Hu, Dali Zeng, Guangheng Zhang and 7 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. International journal of molecular sciences · 2023
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  5. Proteomic Analysis of Barley (Plants (Basel, Switzerland) · 2022
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  6. Review
  7. Article
  8. Frontiers in plant science · 2021
    Article
  9. Article
  10. Plant physiology · 2020
    Article
  11. Article
  12. A unique ferredoxin acts as a player in the low-iron response of photosynthetic organisms.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  13. Roles and maturation of iron-sulfur proteins in plastids.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
  14. Review
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Juan ZhaoState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Zhennan QiuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Banpu RuanState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Shujing KangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Lei HeState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Sen ZhangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Guojun DongState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Jiang HuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Dali ZengState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Guangheng ZhangState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Zhenyu GaoState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Deyong RenState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Xingming HuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Guang ChenState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Longbiao GuoState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Qian QianState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
Li ZhuState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China.
China National Rice Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ferredoxin (Fd) protein as unique electron acceptor, involved in a variety of fundamental metabolic and signaling processes, which is indispensable for plant growth. The molecular mechanisms of Fd such as regulation of electron partitioning, impact of photosynthetic rate and involvement in the carbon fixing remain elusive in rice. Here we reported a heading date delay and yellowish leaf 1 (hdy1) mutant derived from Japonica rice cultivar "Nipponbare" subjected to EMS treatment. In the paddy field, the hdy1 mutant appeared at a significantly late heading date and had yellow-green leaves during the whole growth stage. Further investigation indicated that the abnormal phenotype of hdy1 was connected with depressed pigment content and photosynthetic rate. Genetic analysis results showed that the hdy1 mutant phenotype was caused by a single recessive nuclear gene mutation. Map-based cloning revealed that OsHDY1 is located on chromosome 3 and encodes an ortholog of the AtFdC2 gene. Complementation and overexpression, transgenic plants exhibited the mutant phenotype including head date, leaf color and the transcription levels of the FdC2 were completely rescued by transformation with OsHDY1. Real-time PCR revealed that the expression product of OsHDY1 was detected in almost all of the organs except root, whereas highest expression levels were observed in seeding new leaves. The lower expression levels of HDY1 and content of iron were detected in hdy1 than WT's. The FdC2::GFP was detected in the chloroplasts of rice. Real-time PCR results showed that the expression of many photosynthetic electron transfer related genes in hdy1 were higher than WT. Our results suggest that OsFdC2 plays an important role in photosynthetic rate and development of heading date by regulating electron transfer and chlorophyll content in rice.

Indexed as

Gene Expression Regulation, PlantPhotosynthesisAmino Acid SequenceChlorophyllChloroplastsChromosome MappingChromosomes, PlantCloning, MolecularElectronsFerredoxinsGene Expression ProfilingGenes, PlantGenetic Complementation TestGenetic MarkersIron-Sulfur ProteinsMicroscopy, Electron, TransmissionChlorophyllFerredoxinsGenetic MarkersIron-Sulfur ProteinsPlant Proteins

Identifiers

PMID26598971
PMCPMC4657970
OpenAlexW2174314301

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.