Evidence map›Paper›PMID 26597256›Full record

ArticleThe Journal of infectious diseases2016

Whole-Exome Sequencing Reveals Mutations in Genes Linked to Hemophagocytic Lymphohistiocytosis and Macrophage Activation Syndrome in Fatal Cases of H1N1 Influenza.

Grant S Schulert, Mingce Zhang, Ndate Fall, Ammar Husami, Diane Kissell, Andrew Hanosh, Kejian Zhang, Kristina Davis, Jeffrey M Jentzen, Lena Napolitano and 5 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04336215 (Cohort Study of SARS-CoV-2 Incidence, Transmission, and Disease Severity in Healthcare Workers), which is not on this map. Cited by 94 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed, 1 pooled it
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04336215 completednot on this mapstarted 2020, after this paper: background citation

Cohort Study of SARS-CoV-2 Incidence, Transmission, and Disease Severity in Healthcare Workers

TypeobservationalSponsorRutgers, The State University of New JerseyRan2020 to 2024Enrolled829ConditionsCoronavirus, SARS-CoV-2ArmsNon-Interventional
3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 1 synthesis or guideline pooled it, 169 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Role of DOCK8 in cytokine storm syndromes.The Journal of allergy and clinical immunology · 2025
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Autoinflammatory Contributors to Cytokine Storm.Advances in experimental medicine and biology · 2024
    Review
  15. COVID-19 Pneumonia and Cytokine Storm Syndrome.Advances in experimental medicine and biology · 2024
    Review
  16. Cytokine Storm Syndrome Associated with Hemorrhagic Fever and Other Viruses.Advances in experimental medicine and biology · 2024
    Review
  17. Genetics of Acquired Cytokine Storm Syndromes : Secondary HLH Genetics.Advances in experimental medicine and biology · 2024
    Review
  18. Criteria for Cytokine Storm Syndromes.Advances in experimental medicine and biology · 2024
    Review
  19. Laboratory Features and Pathology of Cytokine Storm Syndromes.Advances in experimental medicine and biology · 2024
    Review
  20. Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Grant S SchulertDivision of Pediatric Rheumatology, Cincinnati Children's Hospital Medical Center, Ohio.
Mingce ZhangDivision of Pediatric Rheumatology, Children's Hospital of Alabama/University of Alabama at Birmingham.
Ndate FallDivision of Pediatric Rheumatology, Cincinnati Children's Hospital Medical Center, Ohio.
Ammar HusamiDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, Ohio.
Diane KissellDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, Ohio.
Andrew HanoshDepartment of Pathology, University of Michigan Medical School, Ann Arbor.
Kejian ZhangDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, Ohio.
Kristina DavisDepartment of Pathology, University of Michigan Medical School, Ann Arbor.
Jeffrey M JentzenDepartment of Pathology, University of Michigan Medical School, Ann Arbor.
Lena NapolitanoDepartment of Surgery, University of Michigan Medical School, Ann Arbor.
Javed SiddiquiDepartment of Pathology, University of Michigan Medical School, Ann Arbor Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor.
Lauren B SmithDepartment of Pathology, University of Michigan Medical School, Ann Arbor.
Paul W HarmsDepartment of Pathology, University of Michigan Medical School, Ann Arbor Department of Dermatology, University of Michigan Medical School, Ann Arbor Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor.
Alexei A GromDivision of Pediatric Rheumatology, Cincinnati Children's Hospital Medical Center, Ohio.
Randy Q CronDivision of Pediatric Rheumatology, Children's Hospital of Alabama/University of Alabama at Birmingham.
Cincinnati Children's Hospital Medical Center · USUniversity of Michigan–Ann Arbor · USMichigan Center for Translational Pathology · USUniversity of Alabama at Birmingham · US

Funding

ROLE OF ANGPTL4, AN ANGIOGENIC MEDIATOR, IN ARTHRITISP30AR047363 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI THOMPSON, SUSAN D · 2001 to 2015
$9.2M
Tissue Repository CoreP30AR070549 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI Leah Claire Kottyan · 2016 to 2026
$7.7M
MUNC13-4 gene Polymorphisms in Macrophage Activation syndrome and Systemic JuveniR01AR059049 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI GROM, ALEXEI A · 2011 to 2015
$1.7M
Omics of Lung DiseasesK12HL119986 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI WHITSETT, JEFFREY A · 2013 to 2017
$1.3M
NHLBI NIH HHS K12 HL119986NHLBI NIH HHS K12-HL119986NIAMS NIH HHS P30 AR047363NIAMS NIH HHS P30 AR070549NIAMS NIH HHS R01 AR059049NIAMS NIH HHS R01-AR059049
6 · The paper itself

Abstract

backgroundSevere H1N1 influenza can be lethal in otherwise healthy individuals and can have features of reactive hemophagocytic lymphohistiocytosis (HLH). HLH is associated with mutations in lymphocyte cytolytic pathway genes, which have not been previously explored in H1N1 influenza.

methodsSixteen cases of fatal influenza A(H1N1) infection, 81% with histopathologic hemophagocytosis, were identified and analyzed for clinical and laboratory features of HLH, using modified HLH-2004 and macrophage activation syndrome (MAS) criteria. Fourteen specimens were subject to whole-exome sequencing. Sequence alignment and variant filtering detected HLH gene mutations and potential disease-causing variants. Cytolytic function of the PRF1 p.A91V mutation was tested in lentiviral-transduced NK-92 natural killer (NK) cells.

resultsDespite several lacking variables, cases of influenza A(H1N1) infection met 44% and 81% of modified HLH-2004 and MAS criteria, respectively. Five subjects (36%) carried one of 3 heterozygous LYST mutations, 2 of whom also possessed the p.A91V PRF1 mutation, which was shown to decrease NK cell cytolytic function. Several patients also carried rare variants in other genes previously observed in MAS.

conclusionsThis cohort of fatal influenza A(H1N1) infections confirms the presence of hemophagocytosis and HLH pathology. Moreover, the high percentage of HLH gene mutations suggests they are risk factors for mortality among individuals with influenza A(H1N1) infection.

Indexed as

ExomeGenetic Predisposition to DiseaseInfluenza A Virus, H1N1 SubtypeCohort StudiesFemaleGenotypeHEK293 CellsHumansInfluenza, HumanKiller Cells, NaturalLymphohistiocytosis, HemophagocyticMacrophage Activation SyndromeMaleMutationPerforinSequence Analysis, DNAPerforincytolytic pathwayH1N1 influenzahemophagocytosisLYSTmacrophage activation syndromeperforin

Identifiers

PMID26597256
PMCPMC4779301
OpenAlexW2273799513

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.