Evidence map›Paper›PMID 26596942›Full record

ArticleAntimicrobial agents and chemotherapy2016

Role of Mitochondrial RNA Polymerase in the Toxicity of Nucleotide Inhibitors of Hepatitis C Virus.

Joy Y Feng, Yili Xu, Ona Barauskas, Jason K Perry, Shekeba Ahmadyar, George Stepan, Helen Yu, Darius Babusis, Yeojin Park, Krista McCutcheon and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Molecules (Basel, Switzerland) · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Gossypol Broadly Inhibits Coronaviruses by Targeting RNA-Dependent RNA Polymerases.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Article
  13. Role of a "Magic" Methyl: 2'-Deoxy-2'-α-F-2'-β-Journal of the American Chemical Society · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Off-TargetAntimicrobial agents and chemotherapy · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Joy Y FengGilead Sciences, Foster City, California, USA joy.feng@gilead.com.
Yili XuGilead Sciences, Foster City, California, USA.
Ona BarauskasGilead Sciences, Foster City, California, USA.
Jason K PerryGilead Sciences, Foster City, California, USA.
Shekeba AhmadyarGilead Sciences, Foster City, California, USA.
George StepanGilead Sciences, Foster City, California, USA.
Helen YuGilead Sciences, Foster City, California, USA.
Darius BabusisGilead Sciences, Foster City, California, USA.
Yeojin ParkGilead Sciences, Foster City, California, USA.
Krista McCutcheonGilead Sciences, Foster City, California, USA.
Michel PerronGilead Sciences, Foster City, California, USA.
Brian E SchultzGilead Sciences, Foster City, California, USA.
Roman SakowiczGilead Sciences, Foster City, California, USA.
Adrian S RayGilead Sciences, Foster City, California, USA.
Gilead Sciences (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Toxicity has emerged during the clinical development of many but not all nucleotide inhibitors (NI) of hepatitis C virus (HCV). To better understand the mechanism for adverse events, clinically relevant HCV NI were characterized in biochemical and cellular assays, including assays of decreased viability in multiple cell lines and primary cells, interaction with human DNA and RNA polymerases, and inhibition of mitochondrial protein synthesis and respiration. NI that were incorporated by the mitochondrial RNA polymerase (PolRMT) inhibited mitochondrial protein synthesis and showed a corresponding decrease in mitochondrial oxygen consumption in cells. The nucleoside released by the prodrug balapiravir (R1626), 4'-azido cytidine, was a highly selective inhibitor of mitochondrial RNA transcription. The nucleotide prodrug of 2'-C-methyl guanosine, BMS-986094, showed a primary effect on mitochondrial function at submicromolar concentrations, followed by general cytotoxicity. In contrast, NI containing multiple ribose modifications, including the active forms of mericitabine and sofosbuvir, were poor substrates for PolRMT and did not show mitochondrial toxicity in cells. In general, these studies identified the prostate cell line PC-3 as more than an order of magnitude more sensitive to mitochondrial toxicity than the commonly used HepG2 cells. In conclusion, analogous to the role of mitochondrial DNA polymerase gamma in toxicity caused by some 2'-deoxynucleotide analogs, there is an association between HCV NI that interact with PolRMT and the observation of adverse events. More broadly applied, the sensitive methods for detecting mitochondrial toxicity described here may help in the identification of mitochondrial toxicity prior to clinical testing.

Indexed as

Antiviral AgentsCell LineDeoxycytidineDNA-Directed DNA PolymeraseDNA-Directed RNA PolymerasesDNA Polymerase gammaGuanosine MonophosphateHepacivirusHepatitis C, ChronicHumansMitochondriaNucleosidesOxygen ConsumptionProtein BiosynthesisRNARNA, Mitochondrial2'-fluoro-2'-methyl-3',5'-diisobutyryldeoxycytidineAntiviral AgentsbalapiravirBMS-986094DeoxycytidineDNA-Directed DNA PolymeraseDNA-Directed RNA PolymerasesDNA Polymerase gammaGuanosine MonophosphateNucleosidesRNARNA, MitochondrialSofosbuvir

Identifiers

PMID26596942
PMCPMC4750701
OpenAlexW2175569396

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.