Evidence map›Paper›PMID 26596763›Full record

ArticleJournal of experimental botany2016

Down-regulation of tomato PHYTOL KINASE strongly impairs tocopherol biosynthesis and affects prenyllipid metabolism in an organ-specific manner.

Juliana Almeida, Mariana da Silva Azevedo, Livia Spicher, Gaétan Glauser, Katharina vom Dorp, Luzia Guyer, Andrea del Valle Carranza, Ramón Asis, Amanda Pereira de Souza, Marcos Buckeridge and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
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  4. Endophytic fungi from Cissus quadrangularis plant a promising source of bioactive compounds.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
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  14. Vitamin E Biosynthesis and Its Regulation in Plants.Antioxidants (Basel, Switzerland) · 2017
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 9 institutions in 6 countries.

Juliana AlmeidaDepartamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, 277, 05508-900, São Paulo, Brazil.
Mariana da Silva AzevedoDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz', Universidade de São Paulo, Av. Pádua Dias, 11, CP 09, 13418-900, Piracicaba, Brazil.
Livia SpicherLaboratory of Plant Physiology, University of Neuchâtel, 2000 Neuchâtel, Switzerland.
Gaétan GlauserNeuchâtel Platform of Analytical Chemistry, University of Neuchâtel, 2000 Neuchâtel, Switzerland.
Katharina vom DorpInstitute of Molecular Physiology and Biotechnology of Plants, University of Bonn, D-53115 Bonn, Germany.
Luzia GuyerInstitute of Plant Biology, University of Zurich, Zollikerstrasse 107, CH-8008 Zurich, Switzerland.
Andrea del Valle CarranzaCIBICI, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, CC 5000, Córdoba, Argentina.
Ramón AsisCIBICI, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, CC 5000, Córdoba, Argentina.
Amanda Pereira de SouzaDepartamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, 277, 05508-900, São Paulo, Brazil.
Marcos BuckeridgeDepartamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, 277, 05508-900, São Paulo, Brazil.
Diego DemarcoDepartamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, 277, 05508-900, São Paulo, Brazil.
Cécile BresINRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France.
Christophe RothanINRA and Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France.
Lázaro Eustáquio Pereira PeresDepartamento de Ciências Biológicas, Escola Superior de Agricultura 'Luiz de Queiroz', Universidade de São Paulo, Av. Pádua Dias, 11, CP 09, 13418-900, Piracicaba, Brazil.
Stefan HörtensteinerInstitute of Plant Biology, University of Zurich, Zollikerstrasse 107, CH-8008 Zurich, Switzerland.
Félix KesslerLaboratory of Plant Physiology, University of Neuchâtel, 2000 Neuchâtel, Switzerland.
Peter DörmannInstitute of Molecular Physiology and Biotechnology of Plants, University of Bonn, D-53115 Bonn, Germany.
Fernando CarrariInstituto de Biotecnología, Instituto Nacional de Tecnología Agropecuaria and Consejo Nacional de Investigaciones Científicas y Técnicas, PO Box 25, B1712WAA, Castelar, Argentina.
Magdalena RossiDepartamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, 277, 05508-900, São Paulo, Brazil mmrossi@usp.br.
Universidade Cidade de São Paulo · BRUniversity of Neuchâtel · CHUniversidade de São Paulo · BRUniversité de Bordeaux · FRUniversity of Bonn · DEUniversity of Zurich · CHNational Institute of Industrial Technology · ARUniversidad Nacional de Córdoba · ARUniversity of Córdoba · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tocopherol, a compound with vitamin E (VTE) activity, is a conserved constituent of the plastidial antioxidant network in photosynthetic organisms. The synthesis of tocopherol involves the condensation of an aromatic head group with an isoprenoid prenyl side chain. The latter, phytyl diphosphate, can be derived from chlorophyll phytol tail recycling, which depends on phytol kinase (VTE5) activity. How plants co-ordinate isoprenoid precursor distribution for supplying biosynthesis of tocopherol and other prenyllipids in different organs is poorly understood. Here, Solanum lycopersicum plants impaired in the expression of two VTE5-like genes identified by phylogenetic analyses, named SlVTE5 and SlFOLK, were characterized. Our data show that while SlFOLK does not affect tocopherol content, the production of this metabolite is >80% dependent on SlVTE5 in tomato, in both leaves and fruits. VTE5 deficiency greatly impacted lipid metabolism, including prenylquinones, carotenoids, and fatty acid phytyl esters. However, the prenyllipid profile greatly differed between source and sink organs, revealing organ-specific metabolic adjustments in tomato. Additionally, VTE5-deficient plants displayed starch accumulation and lower CO2 assimilation in leaves associated with mild yield penalty. Taken together, our results provide valuable insights into the distinct regulation of isoprenoid metabolism in leaves and fruits and also expose the interaction between lipid and carbon metabolism, which results in carbohydrate export blockage in the VTE5-deficient plants, affecting tomato fruit quality.

Indexed as

Biosynthetic PathwaysDown-RegulationLipid MetabolismOrgan SpecificityCarbohydrate MetabolismChlorophyllEstersFruitGasesGene Expression Regulation, PlantGene Knockdown TechniquesGenes, PlantMutationPhotosynthesisPhotosystem II Protein ComplexPhytolChlorophyllEstersGasesPhotosystem II Protein ComplexPhytolPlant ProteinsStarchTocopherolsCarotenoidschlorophyllphytolphytol kinaseprenyllipidsSolanum lycopersicumtocopheroltomatovitamin E.

Identifiers

PMID26596763
PMCPMC4737080
OpenAlexW2180475083

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.