Evidence map›Paper›PMID 26593403›Full record

ArticleEpidemiology and infection2016

Diversity and relatedness of Shiga toxin-producing Escherichia coli and Campylobacter jejuni between farms in a dairy catchment.

H Irshad, A L Cookson, C M Ross, P Jaros, D J Prattley, A Donnison, G McBRIDE, J Marshall, N P French

Abstract read
In one paragraph

Article in Epidemiology and infection, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Zoonotic Transmission ofFrontiers in microbiology · 2022
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

H IrshadmEpiLab,Infectious Disease Research Centre,Hopkirk Research Institute,Massey University,Palmerston North,New Zealand.
A L CooksonmEpiLab,Infectious Disease Research Centre,Hopkirk Research Institute,Massey University,Palmerston North,New Zealand.
C M RossAgResearch Ltd,Ruakura Research Centre,Hamilton,New Zealand.
P JarosmEpiLab,Infectious Disease Research Centre,Hopkirk Research Institute,Massey University,Palmerston North,New Zealand.
D J PrattleymEpiLab,Infectious Disease Research Centre,Hopkirk Research Institute,Massey University,Palmerston North,New Zealand.
A DonnisonAgResearch Ltd,Ruakura Research Centre,Hamilton,New Zealand.
G McBRIDENational Institute of Water and Atmospheric Research (NIWA),Hamilton,New Zealand.
J MarshallmEpiLab,Infectious Disease Research Centre,Hopkirk Research Institute,Massey University,Palmerston North,New Zealand.
N P FrenchmEpiLab,Infectious Disease Research Centre,Hopkirk Research Institute,Massey University,Palmerston North,New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to examine the population structure, transmission and spatial relationship between genotypes of Shiga toxin-producing Escherichia coli (STEC) and Campylobacter jejuni, on 20 dairy farms in a defined catchment. Pooled faecal samples (n = 72) obtained from 288 calves were analysed by real-time polymerase chain reaction (rtPCR) for E. coli serotypes O26, O103, O111, O145 and O157. The number of samples positive for E. coli O26 (30/72) was high compared to E. coli O103 (7/72), O145 (3/72), O157 (2/72) and O111 (0/72). Eighteen E. coli O26 and 53 C. jejuni isolates were recovered from samples by bacterial culture. E. coli O26 and C. jejuni isolates were genotyped using pulsed-field gel electrophoresis and multilocus sequence typing, respectively. All E. coli O26 isolates could be divided into four clusters and the results indicated that E. coli O26 isolates recovered from calves on the same farm were more similar than isolates recovered from different farms in the catchment. There were 11 different sequence types of C. jejuni isolated from the cattle and 22 from water. An analysis of the population structure of C. jejuni isolated from cattle provided evidence of clustering of genotypes within farms, and among groups of farms separated by road boundaries.

Indexed as

AnimalsCampylobacter InfectionsCampylobacter jejuniCattleDairyingElectrophoresis, Gel, Pulsed-FieldEscherichia coli InfectionsNew ZealandPrevalenceReal-Time Polymerase Chain ReactionRiversSequence Analysis, DNAShiga-Toxigenic Escherichia coliTransportationCampylobacterpublic healthShiga-like toxin-producing E. coli

Identifiers

PMID26593403
PMCPMC9150598

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.