Evidence map›Paper›PMID 26593156›Full record

ArticleThe New phytologist2016

The genetic architecture of leaf number and its genetic relationship to flowering time in maize.

Dan Li, Xufeng Wang, Xiangbo Zhang, Qiuyue Chen, Guanghui Xu, Dingyi Xu, Chenglong Wang, Yameng Liang, Lishuan Wu, Cheng Huang and 3 more

Abstract read
In one paragraph

Article in The New phytologist, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Article
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  5. Review
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  8. International journal of molecular sciences · 2024
    Article
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  16. Review
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  19. Leaf Count Aided Novel Framework for Rice (Plants (Basel, Switzerland) · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Dan LiNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Xufeng WangNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Xiangbo ZhangNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Qiuyue ChenNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Guanghui XuNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Dingyi XuNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Chenglong WangNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Yameng LiangNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Lishuan WuNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Cheng HuangNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Jinge TianNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Yaoyao WuNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.
Feng TianNational Maize Improvement Center of China, China Agricultural University, Beijing, 100193, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The number of leaves and their distributions on plants are critical factors determining plant architecture in maize (Zea mays), and leaf number is frequently used as a measure of flowering time, a trait that is key to local environmental adaptation. Here, using a large set of 866 maize-teosinte BC2 S3 recombinant inbred lines genotyped by using 19,838 single nucleotide polymorphism markers, we conducted a comprehensive genetic dissection to assess the genetic architecture of leaf number and its genetic relationship to flowering time. We demonstrated that the two components of total leaf number, the number of leaves above (LA) and below (LB) the primary ear, were under relatively independent genetic control and might be subject to differential directional selection during maize domestication and improvement. Furthermore, we revealed that flowering time and leaf number are commonly regulated at a moderate level. The pleiotropy of the genes ZCN8, dlf1 and ZmCCT on leaf number and flowering time were validated by near-isogenic line analysis. Through fine mapping, qLA1-1, a major-effect locus that specifically affects LA, was delimited to a region with severe recombination suppression derived from teosinte. This study provides important insights into the genetic basis of traits affecting plant architecture and adaptation. The genetic independence of LA from LB enables the optimization of leaf number for ideal plant architecture breeding in maize.

Indexed as

Crosses, GeneticFlowersGenetic Association StudiesInbreedingPhenotypePhysical Chromosome MappingPlant LeavesQuantitative Trait LociReproducibility of ResultsTime FactorsZea maysflowering timegenetic overlapleaf numbermaize (Zea mays)quantitative trait locus (QTL)

Identifiers

PMID26593156
PMCPMC5063108

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.