Evidence map›Paper›PMID 26592930›Full record

ArticleThe Journal of biological chemistry2016

Lipid-Protein Interactions in the Regulated Betaine Symporter BetP Probed by Infrared Spectroscopy.

Günnur Güler, Rebecca M Gärtner, Christine Ziegler, Werner Mäntele

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  7. Innate Immune Response againstInternational journal of molecular sciences · 2020
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  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Günnur GülerFrom the Goethe-University, Institute of Biophysics, Max-von-Laue-Strasse 1, D-60438, Frankfurt am Main, Germany.
Rebecca M GärtnerMax Planck Institute of Biophysics, Department of Structural Biology, Max-von-Laue-Strasse 3, D-60438, Frankfurt am Main, Germany, and.
Christine ZieglerMax Planck Institute of Biophysics, Department of Structural Biology, Max-von-Laue-Strasse 3, D-60438, Frankfurt am Main, Germany, and University of Regensburg, Faculty of Biology and Preclinical Medicine, Universitätsstrasse 31, D-93051, Regensburg, Germany Christine.Ziegler@biophys.mpg.de.
Werner MänteleFrom the Goethe-University, Institute of Biophysics, Max-von-Laue-Strasse 1, D-60438, Frankfurt am Main, Germany, maentele@biophysik.uni-frankfurt.de.
Goethe University Frankfurt · DEMax Planck Institute of Biophysics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Na(+)-coupled betaine symporter BetP senses changes in the membrane state and increasing levels of cytoplasmic K(+) during hyperosmotic stress latter via its C-terminal domain and regulates transport activity according to both stimuli. This intriguing sensing and regulation behavior of BetP was intensively studied in the past. It was shown by several biochemical studies that activation and regulation depends crucially on the lipid composition of the surrounding membrane. In fact, BetP is active and regulated only when negatively charged lipids are present. Recent structural studies have revealed binding of phosphatidylglycerol lipids to functional important parts of BetP, suggesting a functional role of lipid interactions. However, a regulatory role of lipid interactions could only be speculated from the snapshot provided by the crystal structure. Here, we investigate the nature of lipid-protein interactions of BetP reconstituted in closely packed two-dimensional crystals of negatively charged lipids and probed at the molecular level with Fourier transform infrared (FTIR) spectroscopy. The FTIR data indicate that K(+) binding weakens the interaction of BetP especially with the anionic lipid head groups. We suggest a regulation mechanism in which lipid-protein interactions, especially with the C-terminal domain and the functional important gating helices transmembrane helice 3 (TMH3) and TMH12, confine BetP to its down-regulated transport state. As BetP is also activated by changes in the physical state of the membrane, our results point toward a more general mechanism of how active transport can be modified by dynamic lipid-protein interactions.

Indexed as

Corynebacterium glutamicumModels, MolecularBacterial ProteinsCardiolipinsDetergentsEnzyme ActivationGlucosidesHydrophobic and Hydrophilic InteractionsLipid BilayersPeptide FragmentsPhosphatidylglycerolsPhosphatidylinositolsPotassiumProtein ConformationProtein Interaction Domains and MotifsProtein MultimerizationBacterial ProteinsBetP protein, Corynebacterium glutamicumCardiolipinsDetergentsdodecyl maltosideGlucosidesLipid BilayersPeptide FragmentsPhosphatidylglycerolsPhosphatidylinositolsPotassiumRecombinant ProteinsSymportersactivationattenuated total reflection (ATR) FT-IR spectroscopyBetPinfrared spectroscopy (IR spectroscopy)lipid bilayerlipid-protein interactionmembrane lipidosmoregulationphospholipidprotein structure

Identifiers

PMID26592930
PMCPMC4813459
OpenAlexW2173793830

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.