Evidence map›Paper›PMID 26592141›Full record

ArticleVaccine2015

Effect on nasopharyngeal pneumococcal carriage of replacing PCV7 with PCV13 in the Expanded Programme of Immunization in The Gambia.

Anna Roca, Abdoulie Bojang, Christian Bottomley, Rebecca A Gladstone, Jane U Adetifa, Uzochukwu Egere, Sarah Burr, Martin Antonio, Stephen Bentley, Beate Kampmann and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Vaccine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Genomic characterization ofMicrobial genomics · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Observational
  11. Article
  12. Article
  13. Observational
  14. Article
  15. Nasopharyngeal Carriage of Methicillin-ResistantInfectious disease reports · 2021
    Article
  16. Article
  17. Post-VaccinationMicroorganisms · 2020
    Article
  18. Observational
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Anna RocaMedical Research Council Unit, Fajara, The Gambia; London School of Hygiene & Tropical Medicine, London, United Kingdom. Electronic address: aroca@mrc.gm.
Abdoulie BojangMedical Research Council Unit, Fajara, The Gambia.
Christian BottomleyLondon School of Hygiene & Tropical Medicine, London, United Kingdom.
Rebecca A GladstonePathogen Genomics, Wellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom.
Jane U AdetifaMedical Research Council Unit, Fajara, The Gambia.
Uzochukwu EgereMedical Research Council Unit, Fajara, The Gambia.
Sarah BurrMedical Research Council Unit, Fajara, The Gambia; London School of Hygiene & Tropical Medicine, London, United Kingdom.
Martin AntonioMedical Research Council Unit, Fajara, The Gambia.
Stephen BentleyPathogen Genomics, Wellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom.
Beate KampmannMedical Research Council Unit, Fajara, The Gambia; Department of Paediatrics, Imperial College London, United Kingdom.
Pneumo13 Study Group
MRC Unit the Gambia · GMLondon School of Hygiene & Tropical Medicine · GBWellcome Sanger Institute · GB

Funding

Medical Research Council MC_EX_MR/K011944/1Medical Research Council MC_U190074190Medical Research Council MC_U190081991Medical Research Council MC_UP_A900_1122Medical Research Council MR/K012126/1MRC
6 · The paper itself

Abstract

introductionIn 2011, two years after the introduction of 7-valent Pneumococcal conjugate vaccine (PCV7), the Gambian immunization programme replaced PVC7 with PCV13 (13-valent). Our objective was to assess the additional impact of PCV13 on prevalence of pneumococcal nasopharyngeal carriage.

methodsWe recruited healthy Gambian infants who had received three PCV doses. Nasopharyngeal swabs were collected from infants and their mothers during two cross-sectional surveys (CSS) conducted in infants vaccinated with PCV7 (CSS1) and vaccinated with PCV13 (CSS2). Pneumococci were isolated and serotyped following standardized methods. Whole genome sequencing was performed on non-typable pneumococcus isolated in CSS1 and CSS2.

results339 and 350 infants and their mothers were recruited in CSS1 and CSS2, respectively. Overall prevalence of pneumococcal carriage was 85.4% in infants. Among infants, prevalence of vaccine type (VT) carriage was lower in CSS2 [9.4% versus 4.9% (p=0.025) for PCV7-VT; 33.3% versus 18.3% (p<0.001) for PCV13-VT and 23.9% versus 13.7% (p=0.001) for the 6 additional serotypes included in PCV13]. At CSS2, there was a decrease of serotypes 6A (from 15.3% to 5.7%, p<0.001) and 19F (from 5.6% to 1.7%, p=0.007), and an increase of non-typable pneumococci (0.3-6.0%, p<0.001), most of which (82.4%) were from typable serotype backgrounds that had lost the ability to express a capsule. Prevalence of overall and VT carriage in mothers was similar in CSS1 and CSS2.

conclusionsReplacing PCV7 for PCV13 rapidly decreased prevalence of VT carriage among vaccinated Gambian infants. An indirect effect in mothers was not observed yet. Vaccine-driven selection pressure may have been responsible for the increase of non-typable isolates.

Indexed as

SerogroupAdultCarrier StateCross-Sectional StudiesFemaleGambiaHumansInfantMaleNasopharynxPneumococcal InfectionsPneumococcal VaccinesPrevalenceSequence Analysis, DNASerotypingStreptococcus pneumoniae13-valent pneumococcal vaccinePneumococcal VaccinesAfricaEpidemiologyExpanded Programme of ImmunizationNon-typablePCV13PCV7Vaccine-type

Identifiers

PMID26592141
PMCPMC5352730
OpenAlexW2201413188

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.