Evidence map›Paper›PMID 26589571›Full record

ArticleBMC genomics2015

Gene expression profiling in non-human primate jejunum, ileum and colon after total-body irradiation: a comparative study of segment-specific molecular and cellular responses.

Junying Zheng, Junru Wang, Mylene Pouliot, Simon Authier, Daohong Zhou, David S Loose, Martin Hauer-Jensen

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Colonic epithelial regeneration shapes susceptibility tobioRxiv : the preprint server for biology · 2026
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  17. Mechanisms of Normal Tissue Injury From Irradiation.Seminars in radiation oncology · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Junying ZhengDivision of Radiation Health, University of Arkansas for Medical Sciences, Little Rock, Arkansas, 72205, USA. jzheng@uams.edu.
Junru WangDivision of Radiation Health, University of Arkansas for Medical Sciences, Little Rock, Arkansas, 72205, USA. WangJunru@uams.edu.
Mylene PouliotCiToxLAB North America, Laval, Quebec, Canada, H7V 4B3. pouliotm@ca.citoxlab.com.
Simon AuthierCiToxLAB North America, Laval, Quebec, Canada, H7V 4B3. AUTHIERS@ca.citoxlab.com.
Daohong ZhouDivision of Radiation Health, University of Arkansas for Medical Sciences, Little Rock, Arkansas, 72205, USA. DZhou@uams.edu.
David S LooseIntegrative Biology and Pharmacology, University of Texas Medical School at Houston, Houston, TX, 77030, USA. David.S.Loose@uth.tmc.edu.
Martin Hauer-JensenDivision of Radiation Health, University of Arkansas for Medical Sciences, Little Rock, Arkansas, 72205, USA. mhjensen@uams.edu.
University of Arkansas Medical Center · USXLAB (Slovenia) · SITexas Medical Center · US

Funding

The Role o f Tetrahydrobiopterin (BH4) Bioavailability in Radiation-induced Skin InjuryP20GM109005 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI BOERMA, MARJAN · 2015 to 2024
$21.1M
NIGMS NIH HHS P20 GM109005PHS HHS HHSO100201100045C
6 · The paper itself

Abstract

backgroundAlthough extensive studies have investigated radiation-induced injuries in particular gastrointestinal (GI) segments, a systematic comparison among the different segments on the basis of mode, magnitude and mechanism has not been reported. Here, a comparative study of segment-specific molecular and cellular responses was performed on jejunum, ileum and colon obtained at three time points (4, 7 and 12 days after irradiation) from non-human primate (Rhesus macaque) models exposed to 6.7 Gy or 7.4 Gy total body irradiation (TBI).

resultsPathway analysis on the gene expression profiles identified radiation-induced time-, dose- and segment-dependent activation of tumor necrosis factor α (TNFα) cascade, tight junction, apoptosis, cell cycle control/DNA damage repair and coagulation system signaling. Activation of these signaling pathways suggests that colon sustained the severest mucosal barrier disruption and inflammation, and jejunum the greatest DNA damage, apoptosis and endothelial dysfunction. These more pronounced alterations correlate with the high incidence of macroscopic pathologies that are observed in the colon after TBI. Compared to colon and jejunum, ileum was resistant to radiation injury. In addition to the identification a marked increase of TNFα cascade, this study also identified radiation induced strikingly up-regulated tight junction gene CLDN2 (196-fold after 7.4-Gy TBI), matrix degradation genes such as MMP7 (increased 11- and 41-fold after 6.7-Gy and 7.4-Gy TBI), and anoikis mediated gene EDA2R that mediate mucosal shedding and barrier disruption.

conclusionsThis is the first systematic comparative study of the molecular and cellular responses to radiation injury in jejunum, ileum and colon. The strongest activation of TNFα cascades and the striking up-regulation of its down-stream matrix-dissociated genes suggest that TNFα modulation could be a target for mitigating radiation-induced mucosal barrier disruption.

Indexed as

Gene Expression ProfilingTranscriptomeWhole-Body IrradiationAnimalsAnoikisApoptosisCell CycleCluster AnalysisColonGene Expression RegulationIleumImmunity, MucosalIntestinal MucosaJejunumMacaca mulattaMaleReceptors, Aryl HydrocarbonTumor Necrosis Factor-alpha

Identifiers

PMID26589571
PMCPMC4654820
OpenAlexW2177502830

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.