Evidence map›Paper›PMID 26588894›Full record

ArticleBMC evolutionary biology2015

Evolutionary comparison of prenylation pathway in kinetoplastid Leishmania and its sister Leptomonas.

Indira Singh Chauhan, Jaspreet Kaur, Shagun Krishna, Arpita Ghosh, Prashant Singh, Mohammad Imran Siddiqi, Neeloo Singh

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC evolutionary biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Crystal structure of the GDP-bound GTPase domain of Rab5a from Leishmania donovani.Acta crystallographica. Section F, Structural biology communications · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Indira Singh ChauhanBiochemistry Division, CSIR Central Drug Research Institute, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India. chauhan.indira.indira@gmail.com.
Jaspreet KaurDepartment of Biochemistry, Shri Ram Murti Smarak Institute of Medical Sciences, Bareilly, 243202, India. jaspreet_lko232@yahoo.com.
Shagun KrishnaMolecular and Structural Biology Division, CSIR Central Drug Research Institute, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India. krishna.shagun123@gmail.com.
Arpita GhoshXcelris Genomics, Ahmedabad, India. arpita.ghosh@xcelrislabs.com.
Prashant SinghDepartment of Chemistry, Dayanand Anglo Vedic (P.G.) College, Dehradun, 248001, India. prashantraj86@yahoo.com.
Mohammad Imran SiddiqiMolecular and Structural Biology Division, CSIR Central Drug Research Institute, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India. mi_siddiqi@cdri.res.in.
Neeloo SinghBiochemistry Division, CSIR Central Drug Research Institute, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India. neeloo888@yahoo.com.
Central Drug Research Institute · INAnglo American (United Kingdom) · GBInstitute of Medical Sciences · INXcel Energy (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLeptomonas is monogenetic kinetoplastid parasite of insects and is primitive in comparison to Leishmania. Comparative studies of these two kinetoplastid may share light on the evolutionary transition to dixenous parasitism in Leishmania. In order to adapt and survive within two hosts, Leishmania species must have acquired virulence factors in addition to mechanisms that mediate susceptibility/resistance to infection in the pathology associated with disease. Rab proteins are key mediators of vesicle transport and contribute greatly to the evolution of complexity of membrane transport system. In this study we used our whole genome sequence data of these two divergent kinetoplastids to analyze the orthologues/paralogues of Rab proteins.

resultsDuring change of lifestyle from monogenetic (Leptomonas) to digenetic (Leishmania), we found that the prenyl machinery remained unchanged. Geranylgeranyl transferase-I (GGTase-I) was absent in both Leishmania and its sister Leptomonas. Farnesyltransferase (FTase) and geranylgeranyl transferase-II (GGTase-II) were identified for protein prenylation. We predict that activity of the missing alpha-subunit (α-subunit) of GGTase-II in Leptomonas was probably contributed by the α-subunit of FTase, while beta-subunit (β-subunit) of GGTase-II was conserved and indicated functional conservation in the evolution of these two kinetoplastids. Therefore the β-subunit emerges as an excellent target for compounds inhibiting parasite activity in clinical cases of co-infections. We also confirmed that during the evolution to digenetic life style in Leishmania, the parasite acquired capabilities to evade drug action and maintain parasite virulence in the host with the incorporation of short-chain dehydrogenase/reductase (SDR/MDR) superfamily in Rab genes.

conclusionOur study based on whole genome sequences is the first to build comparative evolutionary analysis and identification of prenylation proteins in Leishmania and its sister Leptomonas. The information presented in our present work has importance for drug design targeted to kill L. donovani in humans but not affect the human form of the prenylation enzymes.

Indexed as

Protein PrenylationAlkyl and Aryl TransferasesAnimalsBiological EvolutionGenome, ProtozoanHumansInsectaKinetoplastidaLeishmaniaLeishmaniasisMetabolic Networks and PathwaysAlkyl and Aryl Transferasesgeranylgeranyltransferase type-Ip21(ras) farnesyl-protein transferase

Identifiers

PMID26588894
PMCPMC4654808
OpenAlexW2174255650

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.