Evidence map›Paper›PMID 26588563›Full record

ArticleBiophysical journal2015

Modeling Local X-ROS and Calcium Signaling in the Heart.

Sarita Limbu, Tuan M Hoang-Trong, Benjamin L Prosser, W Jonathan Lederer, M Saleet Jafri

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 32 citations in OpenAlex.

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  9. Mitochondrial mechanosensor in cardiovascular diseases.Vascular biology (Bristol, England) · 2020
    Review
  10. Article
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  13. Quantitative systems models illuminate arrhythmia mechanisms in heart failure: Role of the NaWiley interdisciplinary reviews. Systems biology and medicine · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Sarita LimbuDepartment of Molecular Neuroscience, School of Systems Biology and The Krasnow Institute for Advanced Study, George Mason University, Fairfax, Virginia.
Tuan M Hoang-TrongDepartment of Molecular Neuroscience, School of Systems Biology and The Krasnow Institute for Advanced Study, George Mason University, Fairfax, Virginia.
Benjamin L ProsserDepartment of Physiology, Pennsylvania Muscle Institute, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania.
W Jonathan LedererCenter for Biomedical Engineering and Technology and Department of Physiology University of Maryland School of Medicine, Baltimore, Maryland.
M Saleet JafriDepartment of Molecular Neuroscience, School of Systems Biology and The Krasnow Institute for Advanced Study, George Mason University, Fairfax, Virginia; Center for Biomedical Engineering and Technology and Department of Physiology University of Maryland School of Medicine, Baltimore, Maryland. Electronic address: sjafri@gmu.edu.
Institute for Advanced Study · USUniversity of Maryland, Baltimore · USUniversity of Pennsylvania · US

Funding

Calcium Entrained ArrhythmiasR01HL105239 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI JAFRI, MOHSIN SALEET, LEDERER, WILLIAM JONATHAN · 2011 to 2015
$4.9M
Multiscale spatiotemporal modeling of cardiac mitochondriaU01HL116321 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI JAFRI, MOHSIN SALEET, LEDERER, WILLIAM JONATHAN · 2014 to 2018
$3.5M
Stretch-Dependent Calcium Signaling in HeartR01HL106059 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI LEDERER, WILLIAM JONATHAN · 2011 to 2014
$1.5M
Stretch-dependent X-ROS signaling: implications for cardiomyopathyR00HL114879 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI PROSSER, BENJAMIN LEARS · 2014 to 2016
$728k
NHLBI NIH HHS 5R01HL105239NHLBI NIH HHS 5R01HL106059NHLBI NIH HHS 5U01HL116321NHLBI NIH HHS R00 HL114879NHLBI NIH HHS R00-HL114879NHLBI NIH HHS R01 HL105239NHLBI NIH HHS R01 HL106059NHLBI NIH HHS U01 HL116321
6 · The paper itself

Abstract

Stretching single ventricular cardiac myocytes has been shown experimentally to activate transmembrane nicotinamide adenine dinucleotide phosphate oxidase type 2 to produce reactive oxygen species (ROS) and increase the Ca2+ spark rate in a process called X-ROS signaling. The increase in Ca2+ spark rate is thought to be due to an increase in ryanodine receptor type 2 (RyR2) open probability by direct oxidation of the RyR2 protein complex. In this article, a computational model is used to examine the regulation of ROS and calcium homeostasis by local, subcellular X-ROS signaling and its role in cardiac excitation-contraction coupling. To this end, a four-state RyR2 model was developed that includes an X-ROS-dependent RyR2 mode switch. When activated, [Ca2+]i-sensitive RyR2 open probability increases, and the Ca2+ spark rate changes in a manner consistent with experimental observations. This, to our knowledge, new model is used to study the transient effects of diastolic stretching and subsequent ROS production on RyR2 open probability, Ca2+ sparks, and the myoplasmic calcium concentration ([Ca2+]i) during excitation-contraction coupling. The model yields several predictions: 1) [ROS] is produced locally near the RyR2 complex during X-ROS signaling and increases by an order of magnitude more than the global ROS signal during myocyte stretching; 2) X-ROS activation just before the action potential, corresponding to ventricular filling during diastole, increases the magnitude of the Ca2+ transient; 3) during prolonged stretching, the X-ROS-induced increase in Ca2+ spark rate is transient, so that long-sustained stretching does not significantly increase sarcoplasmic reticulum Ca2+ leak; and 4) when the chemical reducing capacity of the cell is decreased, activation of X-ROS signaling increases sarcoplasmic reticulum Ca2+ leak and contributes to global oxidative stress, thereby increases the possibility of arrhythmia. The model provides quantitative information not currently obtainable through experimental means and thus provides a framework for future X-ROS signaling experiments.

Indexed as

Calcium SignalingModels, CardiovascularAnimalsHeart VentriclesHumansMyocytes, CardiacReactive Oxygen SpeciesVentricular FunctionReactive Oxygen Species

Identifiers

PMID26588563
PMCPMC4656861
OpenAlexW2176153302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.