Evidence map›Paper›PMID 26587832›Full record

ArticlePloS one2015

Pooled Sequencing of Candidate Genes Implicates Rare Variants in the Development of Asthma Following Severe RSV Bronchiolitis in Infancy.

Dara G Torgerson, Tusar Giri, Todd E Druley, Jie Zheng, Scott Huntsman, Max A Seibold, Andrew L Young, Toni Schweiger, Huiqing Yin-Declue, Geneline D Sajol and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Wheezing in Infancy: An Overview of Recent Literature.Current allergy and asthma reports · 2017
    Review
  6. Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 1 country.

Dara G TorgersonDepartment of Medicine, University of California San Francisco, San Francisco, California, United States of America.
Tusar GiriDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Todd E DruleyCenter for Genome Sciences and Systems Biology, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Jie ZhengDepartment of Biostatistics, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Scott HuntsmanDepartment of Medicine, University of California San Francisco, San Francisco, California, United States of America.
Max A SeiboldIntegrated Center for Genes, Environment and Health, National Jewish Health, Denver, Colorado, United States of America.
Andrew L YoungCenter for Genome Sciences and Systems Biology, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Toni SchweigerDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Huiqing Yin-DeclueDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Geneline D SajolDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Kenneth B SchechtmanDepartment of Biostatistics, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Ryan D HernandezDepartment of Bioengineering and Therapeutic Sciences, Institute of Human Genetics, and California Institute of Quantitative Biosciences (QB3), University of California San Francisco, San Francisco, California, United States of America.
Adrienne G RandolphDepartment of Anesthesiology, Boston Children's Hospital, Boston, Massachusetts, United States of America.
Leonard B BacharierDepartment of Pediatrics, Washington University School of Medicine and St. Louis Children's Hospital, St. Louis, Missouri, United States of America.
Mario CastroDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri, United States of America.
Washington University in St. Louis · USUniversity of California, San Francisco · USBoston Children's Hospital · USQB3 · USSt. Louis Children's Hospital · USUniversity of Colorado Denver · US

Funding

Washington University Institute of Clinical and Translational Sciences (UL1)UL1RR024992 · NCRR · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2007 to 2011
$45.4M
Washington University Institute of Clinical and Translational SciencesUL1TR000448 · NCATS · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2012 to 2016
$41.4M
New Approaches for Empowering Studies of Asthma in Populations of African DescentR01HL104608 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI BARNES, KATHLEEN C, KENNY, EIMEAR ELIZABETH · 2011 to 2022
$23.1M
CLINICAL, PHARMACOLOGY, DRUG ACTION &PHARMACOKINETICST32GM007546 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Radojka Savic · 1985 to 2026
$8.9M
Social Interventions to address disparities In young adult tobacco useP60MD006902 · NIMHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HIATT, ROBERT A · 2012 to 2016
$6.4M
Gene-environments and Admixture in Latino Asthmatics (GALA 2)R01ES015794 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BURCHARD, ESTEBAN GONZALEZ · 2008 to 2012
$5.4M
Whole Genome Analyses for Asthma in Latino PopulationsR01HL088133 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BURCHARD, ESTEBAN GONZALEZ · 2008 to 2012
$3.8M
Determinants of Asthma Following RSV Bronchiolitis in Early LifeR01HL092486 · NHLBI · WASHINGTON UNIVERSITY · PI BACHARIER, LEONARD B, CASTRO, MARIO · 2009 to 2012
$3.0M
GENETIC, BIOLOGIC, &IMMUNOLOGIC DETERMINANTS OF ASTHMAR01HL061895 · NHLBI · WASHINGTON UNIVERSITY · PI CASTRO, MARIO · 1998 to 2006
$2.6M
Genetics of Asthma In Latino AmericansK23HL004464 · NHLBI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI BURCHARD, ESTEBAN GONZALEZ · 2001 to 2005
$609k
NCATS NIH HHS UL1 TR000448NCRR NIH HHS UL1 RR024992NCRR NIH HHS UL1 RR024992-01NHLBI NIH HHS K23 HL004464NHLBI NIH HHS R01-HL004464NHLBI NIH HHS R01 HL061895NHLBI NIH HHS R01 HL088133NHLBI NIH HHS R01-HL088133NHLBI NIH HHS R01 HL092486NHLBI NIH HHS R01 HL104608NHLBI NIH HHS R01-HL104608NHLBI NIH HHS R01 HL 61895NIEHS NIH HHS R01 ES015794NIEHS NIH HHS R01-ES015794NIGMS NIH HHS T32 GM007546NIGMS NIH HHS T32-GM007546NIMHD NIH HHS P60 MD006902NIMHD NIH HHS P60MD006902
6 · The paper itself

Abstract

Severe infection with respiratory syncytial virus (RSV) during infancy is strongly associated with the development of asthma. To identify genetic variation that contributes to asthma following severe RSV bronchiolitis during infancy, we sequenced the coding exons of 131 asthma candidate genes in 182 European and African American children with severe RSV bronchiolitis in infancy using anonymous pools for variant discovery, and then directly genotyped a set of 190 nonsynonymous variants. Association testing was performed for physician-diagnosed asthma before the 7th birthday (asthma) using genotypes from 6,500 individuals from the Exome Sequencing Project (ESP) as controls to gain statistical power. In addition, among patients with severe RSV bronchiolitis during infancy, we examined genetic associations with asthma, active asthma, persistent wheeze, and bronchial hyperreactivity (methacholine PC20) at age 6 years. We identified four rare nonsynonymous variants that were significantly associated with asthma following severe RSV bronchiolitis, including single variants in ADRB2, FLG and NCAM1 in European Americans (p = 4.6x10-4, 1.9x10-13 and 5.0x10-5, respectively), and NOS1 in African Americans (p = 2.3x10-11). One of the variants was a highly functional nonsynonymous variant in ADRB2 (rs1800888), which was also nominally associated with asthma (p = 0.027) and active asthma (p = 0.013) among European Americans with severe RSV bronchiolitis without including the ESP. Our results suggest that rare nonsynonymous variants contribute to the development of asthma following severe RSV bronchiolitis in infancy, notably in ADRB2. Additional studies are required to explore the role of rare variants in the etiology of asthma and asthma-related traits following severe RSV bronchiolitis.

Indexed as

Genetic Association StudiesAsthmaBlack or African AmericanBronchiolitis, ViralCD56 AntigenChildChild, PreschoolExomeFemaleFilaggrin ProteinsHumansInfantMaleReceptors, Adrenergic, beta-2Respiratory Syncytial VirusesS100 ProteinsADRB2 protein, humanCD56 AntigenFilaggrin ProteinsFLG protein, humanNCAM1 protein, humanReceptors, Adrenergic, beta-2S100 Proteins

Identifiers

PMID26587832
PMCPMC4654486
OpenAlexW2264704432

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.