Evidence map›Paper›PMID 26587711›Full record

ArticleNature chemistry2015

Monitoring one-electron photo-oxidation of guanine in DNA crystals using ultrafast infrared spectroscopy.

James P Hall, Fergus E Poynton, Páraic M Keane, Sarah P Gurung, John A Brazier, David J Cardin, Graeme Winter, Thorfinnur Gunnlaugsson, Igor V Sazanovich, Michael Towrie and 3 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
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  4. A database overview of metal-coordination distances in metalloproteins.Acta crystallographica. Section D, Structural biology · 2024
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  10. Photorelease of a metal-binding pharmacophore from a Ru(II) polypyridine complex.Dalton transactions (Cambridge, England : 2003) · 2021
    Article
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  13. AnChemical science · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

James P HallDepartment of Chemistry, University of Reading, Whiteknights, Reading RG6 6AD, UK.
Fergus E PoyntonSchool of Chemistry, Trinity College, University of Dublin, Dublin 2, Ireland.
Páraic M KeaneDepartment of Chemistry, University of Reading, Whiteknights, Reading RG6 6AD, UK.
Sarah P GurungDepartment of Chemistry, University of Reading, Whiteknights, Reading RG6 6AD, UK.
John A BrazierDepartment of Pharmacy, University of Reading, Whiteknights, Reading RG6 6AD, UK.
David J CardinDepartment of Chemistry, University of Reading, Whiteknights, Reading RG6 6AD, UK.
Graeme WinterDiamond Light Source, Harwell Science and Innovation Campus, Didcot, Oxfordshire OX11 0QX, UK.
Thorfinnur GunnlaugssonSchool of Chemistry, Trinity College, University of Dublin, Dublin 2, Ireland.
Igor V SazanovichCentral Laser Facility, Research Complex at Harwell, Science &Technology Facilities Council, Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, UK.
Michael TowrieCentral Laser Facility, Research Complex at Harwell, Science &Technology Facilities Council, Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, UK.
Christine J CardinDepartment of Chemistry, University of Reading, Whiteknights, Reading RG6 6AD, UK.ORCID http://orcid.org/0000-0002-2556-9995
John M KellySchool of Chemistry, Trinity College, University of Dublin, Dublin 2, Ireland.
Susan J QuinnSchool of Chemistry, University College Dublin, Dublin 4, Ireland.
Trinity College Dublin · IEDiamond Light Source · GBUniversity of Reading · GBScience and Technology Facilities Council · GBUniversity College Dublin · IE

Funding

Biotechnology and Biological Sciences Research Council BB/K019279/1Biotechnology and Biological Sciences Research Council BB/M004635/1
6 · The paper itself

Abstract

To understand the molecular origins of diseases caused by ultraviolet and visible light, and also to develop photodynamic therapy, it is important to resolve the mechanism of photoinduced DNA damage. Damage to DNA bound to a photosensitizer molecule frequently proceeds by one-electron photo-oxidation of guanine, but the precise dynamics of this process are sensitive to the location and the orientation of the photosensitizer, which are very difficult to define in solution. To overcome this, ultrafast time-resolved infrared (TRIR) spectroscopy was performed on photoexcited ruthenium polypyridyl-DNA crystals, the atomic structure of which was determined by X-ray crystallography. By combining the X-ray and TRIR data we are able to define both the geometry of the reaction site and the rates of individual steps in a reversible photoinduced electron-transfer process. This allows us to propose an individual guanine as the reaction site and, intriguingly, reveals that the dynamics in the crystal state are quite similar to those observed in the solvent medium.

Indexed as

Crystallography, X-RayDNAElectronsGuanineModels, MolecularOxidation-ReductionSpectrophotometry, InfraredDNAGuanine

Identifiers

PMID26587711
OpenAlexW1878606291

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.