Evidence map›Paper›PMID 26586429›Full record

ArticleCell reports2015

Transcriptional Landscape of Cardiomyocyte Maturation.

Hideki Uosaki, Patrick Cahan, Dong I Lee, Songnan Wang, Matthew Miyamoto, Laviel Fernandez, David A Kass, Chulan Kwon

Abstract read
In one paragraph

Article in Cell reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. bioRxiv : the preprint server for biology · 2025
    Article
  13. Enhanced fatty acid oxidation via SCD1 downregulation fuels cardiac reprogramming.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  14. Article
  15. Review
  16. Molecular Regulation of Cardiomyocyte Maturation.Current cardiology reports · 2025
    Review
  17. Article
  18. Article
  19. Article
  20. Review

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hideki UosakiDivision of Cardiology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; The Johns Hopkins Institute for Cell Engineering, Baltimore, MD 21205, USA.
Patrick CahanStem Cell Transplantation Program, Division of Pediatric Hematology and Oncology, Manton Center for Orphan Disease Research, Howard Hughes Medical Institute, Boston Children's Hospital and Dana Farber Cancer Institute, Boston, MA 02115, USA; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA; Harvard Stem Cell Institute, Cambridge, MA 02138, USA.
Dong I LeeDivision of Cardiology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Songnan WangDivision of Cardiology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; The Johns Hopkins Institute for Cell Engineering, Baltimore, MD 21205, USA.
Matthew MiyamotoDivision of Cardiology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; The Johns Hopkins Institute for Cell Engineering, Baltimore, MD 21205, USA.
Laviel FernandezDivision of Cardiology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; The Johns Hopkins Institute for Cell Engineering, Baltimore, MD 21205, USA.
David A KassDivision of Cardiology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Chulan KwonDivision of Cardiology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; The Johns Hopkins Institute for Cell Engineering, Baltimore, MD 21205, USA. Electronic address: ckwon13@jhmi.edu.

Funding

Shared Resource CoresP01HL107153 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI HART, GERALD WARREN · 2011 to 2017
$16.8M
Non-Canonical Notch Regulation of Cardiovascular ProgenitorsR01HL111198 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI KWON, CHULAN · 2012 to 2016
$2.0M
PKG Redox Modulation of Cardiac Function and DiseaseR01HL119012 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI KASS, DAVID ALAN · 2013 to 2016
$1.6M
Pluripotent stem cell-derived HSCs: improvements and molecular mechanismsK01DK096013 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI CAHAN, PATRICK · 2013 to 2017
$781k
Howard Hughes Medical InstituteNHLBI NIH HHS P01 HL107153NHLBI NIH HHS R01 HL111198NHLBI NIH HHS R01HL111198NHLBI NIH HHS R01 HL119012NIDDK NIH HHS K01 DK096013NIDDK NIH HHS K01DK096013
6 · The paper itself

Abstract

Decades of progress in developmental cardiology has advanced our understanding of the early aspects of heart development, including cardiomyocyte (CM) differentiation. However, control of the CM maturation that is subsequently required to generate adult myocytes remains elusive. Here, we analyzed over 200 microarray datasets from early embryonic to adult hearts and identified a large number of genes whose expression shifts gradually and continuously during maturation. We generated an atlas of integrated gene expression, biological pathways, transcriptional regulators, and gene regulatory networks (GRNs), which show discrete sets of key transcriptional regulators and pathways activated or suppressed during CM maturation. We developed a GRN-based program named MatStat(CM) that indexes CM maturation status. MatStat(CM) reveals that pluripotent-stem-cell-derived CMs mature early in culture but are arrested at the late embryonic stage with aberrant regulation of key transcription factors. Our study provides a foundation for understanding CM maturation.

Indexed as

AnimalsCell DifferentiationCell LineEmbryonic Stem CellsGene ExpressionGene Expression Regulation, DevelopmentalGene Regulatory NetworksMiceMyocytes, CardiacPluripotent Stem CellsTranscription FactorsTranscription, GeneticTranscription Factors

Identifiers

PMID26586429
PMCPMC4662925

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.