Evidence map›Paper›PMID 26585826›Full record

ArticleG3 (Bethesda, Md.)2015

Genomic Analysis of ATP Efflux in Saccharomyces cerevisiae.

Theodore W Peters, Aaron W Miller, Cendrine Tourette, Hannah Agren, Alan Hubbard, Robert E Hughes

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Antimicrobial Peptide againstPharmaceutics · 2020
    Article
  4. Screening theAntimicrobial agents and chemotherapy · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Theodore W PetersThe Buck Institute for Research on Aging, Novato, California 94945.
Aaron W MillerThe Buck Institute for Research on Aging, Novato, California 94945.
Cendrine TouretteThe Buck Institute for Research on Aging, Novato, California 94945.
Hannah AgrenThe Buck Institute for Research on Aging, Novato, California 94945.
Alan HubbardSchool of Public Health, Division of Biostatistics, University of California, Berkeley, California 94729-7358.
Robert E HughesThe Buck Institute for Research on Aging, Novato, California 94945 rhughes@buckinstitute.org.
Buck Institute for Research on Aging · USUniversity of California, Berkeley · US

Funding

Training in Basic Research on Aging and Age-Related DiseaseT32AG000266 · NIA · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Lisa M Ellerby · 1998 to 2026
$13.8M
Protein Interactions and Protein Conformation in Aging and Disease (6 of 11)RL1GM084432 · NIGMS · BUCK INSTITUTE FOR RESEARCH ON AGING · PI HUGHES, ROBERT E · 2007 to 2011
$2.4M
NIA NIH HHS T32 AG000266NIGMS NIH HHS RL1 GM084432
6 · The paper itself

Abstract

Adenosine triphosphate (ATP) plays an important role as a primary molecule for the transfer of chemical energy to drive biological processes. ATP also functions as an extracellular signaling molecule in a diverse array of eukaryotic taxa in a conserved process known as purinergic signaling. Given the important roles of extracellular ATP in cell signaling, we sought to comprehensively elucidate the pathways and mechanisms governing ATP efflux from eukaryotic cells. Here, we present results of a genomic analysis of ATP efflux from Saccharomyces cerevisiae by measuring extracellular ATP levels in cultures of 4609 deletion mutants. This screen revealed key cellular processes that regulate extracellular ATP levels, including mitochondrial translation and vesicle sorting in the late endosome, indicating that ATP production and transport through vesicles are required for efflux. We also observed evidence for altered ATP efflux in strains deleted for genes involved in amino acid signaling, and mitochondrial retrograde signaling. Based on these results, we propose a model in which the retrograde signaling pathway potentiates amino acid signaling to promote mitochondrial respiration. This study advances our understanding of the mechanism of ATP secretion in eukaryotes and implicates TOR complex 1 (TORC1) and nutrient signaling pathways in the regulation of ATP efflux. These results will facilitate analysis of ATP efflux mechanisms in higher eukaryotes.

Indexed as

Genome, FungalGenomicsAdenosine TriphosphateComputational BiologyEndosomal Sorting Complexes Required for TransportExtracellular SpaceGene OntologyMetabolic Networks and PathwaysMitochondriaMutationSaccharomyces cerevisiaeSignal TransductionAdenosine TriphosphateEndosomal Sorting Complexes Required for TransportATPmitochondriasecretionTORC1yeast

Identifiers

PMID26585826
PMCPMC4704715
OpenAlexW2223900040

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.