Evidence map›Paper›PMID 26585386›Full record

ArticleMolecular cell2015

Polyketide Quinones Are Alternate Intermediate Electron Carriers during Mycobacterial Respiration in Oxygen-Deficient Niches.

Amitesh Anand, Priyanka Verma, Anil Kumar Singh, Sandeep Kaushik, Rajesh Pandey, Ce Shi, Harneet Kaur, Manbeena Chawla, Chandra Kumar Elechalawar, Dhirendra Kumar and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
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  6. Review
  7. Article
  8. Article
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  14. Review
  15. Architecture of the mycobacterial succinate dehydrogenase with a membrane-embedded Rieske FeS cluster.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Biofilms of the non-tuberculousCell surface (Amsterdam, Netherlands) · 2020
    Article
  17. Article
  18. Bioenergetic Inhibitors: Antibiotic Efficacy and Mechanisms of Action inFrontiers in cellular and infection microbiology · 2020
    Review
  19. Adaptive evolution reveals a tradeoff between growth rate and oxidative stress during naphthoquinone-based aerobic respiration.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 10 institutions in 2 countries.

Amitesh AnandCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110020, India; Academy of Scientific and Innovative Research, Rafi Marg, New Delhi 110001, India.
Priyanka VermaNational Institute of Immunology, Aruna Asaf Ali Marg, New Delhi 110067, India.
Anil Kumar SinghCSIR-North East Institute of Science and Technology, Jorhat 785006, India.
Sandeep KaushikCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110020, India.
Rajesh PandeyCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110020, India.
Ce ShiDepartment of Medicinal Chemistry, University of Minnesota, Minneapolis, MN 55455, USA.
Harneet KaurCenter for Drug Design, University of Minnesota, Minneapolis, MN 55455, USA.
Manbeena ChawlaDepartment of Microbiology and Cell Biology, Centre for Infectious Disease and Research, Indian Institute of Science, Bangalore 560012, India.
Chandra Kumar ElechalawarAcademy of Scientific and Innovative Research, Rafi Marg, New Delhi 110001, India; CSIR-Indian Institute of Chemical Technology, Hyderabad 500007, India.
Dhirendra KumarCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110020, India.
Yong YangWadsworth Center, New York State Department of Health, Albany, NY 12201, USA.
Neel S BhaveshInternational Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi 110067, India.
Rajkumar BanerjeeAcademy of Scientific and Innovative Research, Rafi Marg, New Delhi 110001, India; CSIR-Indian Institute of Chemical Technology, Hyderabad 500007, India.
Debasis DashCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110020, India.
Amit SinghDepartment of Microbiology and Cell Biology, Centre for Infectious Disease and Research, Indian Institute of Science, Bangalore 560012, India.
Vivek T NatarajanCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110020, India.
Anil K OjhaWadsworth Center, New York State Department of Health, Albany, NY 12201, USA.
Courtney C AldrichDepartment of Medicinal Chemistry, University of Minnesota, Minneapolis, MN 55455, USA; Center for Drug Design, University of Minnesota, Minneapolis, MN 55455, USA.
Rajesh S GokhaleCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110020, India; Academy of Scientific and Innovative Research, Rafi Marg, New Delhi 110001, India; National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi 110067, India. Electronic address: rsg@igib.res.in.
Institute of Genomics and Integrative Biology · INAcademy of Scientific and Innovative Research · INUniversity of Minnesota · USIndian Institute of Science Bangalore · INIndian Institute of Chemical Technology · INInternational Centre for Genetic Engineering and Biotechnology · INNational Institute of Immunology · INNew York State Department of Health · USNorth East Institute of Science and Technology · INWadsworth Center · US

Funding

Design of Antituberculosis Agents that Target Siderophore BiosynthesisR01AI070219 · NIAID · UNIVERSITY OF MINNESOTA · PI ALDRICH, COURTNEY C · 2006 to 2013
$2.2M
DBT-Wellcome Trust India Alliance 500034-Z-09-ZNIAID NIH HHS AI-070219NIAID NIH HHS R01 AI070219Wellcome Trust
6 · The paper itself

Abstract

Mycobacterium tuberculosis (Mtb) adaptation to hypoxia is considered crucial to its prolonged latent persistence in humans. Mtb lesions are known to contain physiologically heterogeneous microenvironments that bring about differential responses from bacteria. Here we exploit metabolic variability within biofilm cells to identify alternate respiratory polyketide quinones (PkQs) from both Mycobacterium smegmatis (Msmeg) and Mtb. PkQs are specifically expressed in biofilms and other oxygen-deficient niches to maintain cellular bioenergetics. Under such conditions, these metabolites function as mobile electron carriers in the respiratory electron transport chain. In the absence of PkQs, mycobacteria escape from the hypoxic core of biofilms and prefer oxygen-rich conditions. Unlike the ubiquitous isoprenoid pathway for the biosynthesis of respiratory quinones, PkQs are produced by type III polyketide synthases using fatty acyl-CoA precursors. The biosynthetic pathway is conserved in several other bacterial genomes, and our study reveals a redox-balancing chemicocellular process in microbial physiology.

Indexed as

BiofilmsAcyl Coenzyme ABacterial ProteinsBiosynthetic PathwaysCell HypoxiaMycobacterium smegmatisMycobacterium tuberculosisOxidation-ReductionPolyketidesPolyketide SynthasesQuinonesAcyl Coenzyme ABacterial ProteinsPolyketidesPolyketide SynthasesQuinones

Identifiers

PMID26585386
PMCPMC6051517
OpenAlexW2178761808

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.