Evidence map›Paper›PMID 26585228›Full record

ArticleJournal of experimental botany2016

Transcriptome analysis reveals the role of the root hairs as environmental sensors to maintain plant functions under water-deficiency conditions.

Miroslaw Kwasniewski, Agata Daszkowska-Golec, Agnieszka Janiak, Karolina Chwialkowska, Urszula Nowakowska, Gaurav Sablok, Iwona Szarejko

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
11.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 82 citations in OpenAlex.

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  19. Methyl Jasmonate Affects Photosynthesis Efficiency, Expression ofInternational journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Miroslaw KwasniewskiDepartment of Genetics, University of Silesia in Katowice, 40-032 Katowice, Poland miroslaw.kwasniewski@us.edu.pl.
Agata Daszkowska-GolecDepartment of Genetics, University of Silesia in Katowice, 40-032 Katowice, Poland.
Agnieszka JaniakDepartment of Genetics, University of Silesia in Katowice, 40-032 Katowice, Poland.
Karolina ChwialkowskaDepartment of Genetics, University of Silesia in Katowice, 40-032 Katowice, Poland.
Urszula NowakowskaDepartment of Genetics, University of Silesia in Katowice, 40-032 Katowice, Poland.
Gaurav SablokPlant Functional Biology and Climate Change Cluster, University of Technology, Sydney, Ultimo, NSW 2007, Australia.
Iwona SzarejkoDepartment of Genetics, University of Silesia in Katowice, 40-032 Katowice, Poland.
University of Silesia in Katowice · PLUniversity of Technology Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An important part of the root system is the root hairs, which play a role in mineral and water uptake. Here, we present an analysis of the transcriptomic response to water deficiency of the wild-type (WT) barley cultivar 'Karat' and its root-hairless mutant rhl1.a. A comparison of the transcriptional changes induced by water stress resulted in the identification of genes whose expression was specifically affected in each genotype. At the onset of water stress, more genes were modulated by water shortage in the roots of the WT plants than in the roots of rhl1.a. The roots of the WT plants, but not of rhl1.a, specifically responded with the induction of genes that are related to the abscisic acid biosynthesis, stomatal closure, and cell wall biogenesis, thus indicating the specific activation of processes that are related to water-stress signalling and protection. On the other hand, the processes involved in the further response to abiotic stimuli, including hydrogen peroxide, heat, and high light intensity, were specifically up-regulated in the leaves of rhl1.a. An extended period of severe stress caused more drastic transcriptome changes in the roots and leaves of the rhl1.a mutant than in those of the WT. These results are in agreement with the much stronger damage to photosystem II in the rhl1.a mutant than in its parent cultivar after 10 d of water stress. Taking into account the putative stress sensing and signalling features of the root hair transcriptome, we discuss the role of root hairs as sensors of environmental conditions.

Indexed as

DroughtsTranscriptomeDNA, PlantGene Expression ProfilingHordeumPlant RootsSequence Analysis, DNADNA, PlantBarleydroughtenvironmental sensorgene expressionroot hairwater stress.

Identifiers

PMID26585228
PMCPMC4753848
OpenAlexW2176475027

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.