Evidence map›Paper›PMID 26584827›Full record

ArticleParasitology research2016

Species discrimination in the subfamily Ostertagiinae of Northern China: assessment of DNA barcode in a taxonomically challenging group.

Jizhou Lv, Yongning Zhang, Chunyan Feng, Xiangfen Yuan, Degang Sun, Junhua Deng, Caixia Wang, Shaoqiang Wu, Xiangmei Lin

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Article in Parasitology research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jizhou LvInstitute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100029, People's Republic of China.
Yongning ZhangInstitute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100029, People's Republic of China.
Chunyan FengInstitute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100029, People's Republic of China.
Xiangfen YuanInstitute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100029, People's Republic of China.
Degang SunHuangdao Entry-Exit Inspection and Quarantine Bureau, Qingdao, 266555, People's Republic of China.
Junhua DengInstitute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100029, People's Republic of China.
Caixia WangInstitute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100029, People's Republic of China.
Shaoqiang WuInstitute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100029, People's Republic of China. sqwu@sina.com.
Xiangmei LinInstitute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100029, People's Republic of China. linxm@caiq.gov.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gastrointestinal nematodes within the subfamily Ostertagiinae (Teladorsagia, Ostertagia, and Marshallagia et al.) are among the most common infections of domesticated livestock. These parasites are of particular interest, as many of the species within this group are of economic importance worldwide. Traditionally, nematode species designations have been based on morphological criteria. However, this group possesses poorly defined species. There is an urgent need to develop a reliable technique that can distinguish species of Ostertagiinae. DNA barcoding has been proved to be a powerful tool to identify species of birds, mammals, and arthropods, but this technique has not yet been examined for identifying species of Ostertagiinae. In this study, a total of 138 mitochondrial DNA (mtDNA) cytochrome c oxidase subunit I (COI) sequences from individuals representing 11 species of Ostertagiinae were acquired by PCR for the first time. The specimens were collected from pastoral area of northern China. Genetic divergence analyses showed that mean interspecific Kimura two-parameter distances of COI (13.61 %) were about four times higher than the mean value of the intraspecific divergence (3.69 %). Then, the performance of the COI to identify species of Ostertagiinae was evaluated by identification success rates using nearest neighbor (NN) and BLASTn. The results indicated that the rates of correct sequence identification for COI were high (>80 %) when using the NN and BLASTn methods. Besides, the deep lineage divergences are detected in Teladorsagia circumcincta. Meanwhile, the analyses also detected no genetic differentiation between some species such as Ostertagia hahurica and Ostertagia buriatica. These results indicate that the traditional status of species within Ostertagiinae should be closely examined based on the molecular data.

Indexed as

AnimalsCattleCattle DiseasesChinaDNA Barcoding, TaxonomicDNA, HelminthDNA, MitochondrialSheepSheep DiseasesTrichostrongyloideaTrichostrongyloidiasisDNA, HelminthDNA, MitochondrialCOIDNA barcodingOstertagiinaeSpecies identification

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.