ArticlePlant physiology2016
Profiling of the Early Nitrogen Stress Response in the Diatom Phaeodactylum tricornutum Reveals a Novel Family of RING-Domain Transcription Factors.
Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed, 46 citations in OpenAlex.
- Identification, characterization, and function analysis of the VIT family in Phaeodactylum tricornutum.Scientific reports · 2025Article
- DiatOmicBase: a versatile gene-centered platform for mining functional omics data in diatom research.The Plant journal : for cell and molecular biology · 2025Article
- Comparative Transcriptomics to Identify RNA Writers and Erasers in Microalgae.International journal of molecular sciences · 2024Article
- A Knockout of the Photoreceptor PtAureo1a Results in Altered Diel Expression of Diatom Clock Components.Plants (Basel, Switzerland) · 2024Article
- Bioinformatics-Based Screening Approach for the Identification and Characterization of Lipolytic Enzymes from the Marine DiatomMarine drugs · 2023Article
- Symbiont population control by host-symbiont metabolic interaction in Symbiodiniaceae-cnidarian associations.Nature communications · 2020Article
- Amino Acid Catabolism During Nitrogen Limitation inFrontiers in plant science · 2020Review
- Strategies among phytoplankton in response to alleviation of nutrient stress in a subtropical gyre.The ISME journal · 2019Article
- RSH enzyme diversity for (p)ppGpp metabolism in Phaeodactylum tricornutum and other diatoms.Scientific reports · 2019Article
- Transcriptomic Analysis Reveals the Roles of Detoxification Systems in Response to Mercury inBiomolecules · 2019Article
- Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom.Nature communications · 2019Article
- Identification and characterisation of the novel endogenous promoter HASP1 and its signal peptide from Phaeodactylum tricornutum.Scientific reports · 2019Article
- Genome editing in diatoms: achievements and goals.Plant cell reports · 2018Review
- Dynamic Changes between Two LHCX-Related Energy Quenching Sites Control Diatom Photoacclimation.Plant physiology · 2018Article
- Homoeolog expression bias in allopolyploid oleaginous marine diatom Fistulifera solaris.BMC genomics · 2018Article
- The transcription factor bZIP14 regulates the TCA cycle in the diatomThe EMBO journal · 2017Article
- Article
- Multisignal control of expression of the LHCX protein family in the marine diatom Phaeodactylum tricornutum.Journal of experimental botany · 2016Article
- Genetic Manipulation of Competition for Nitrate between Heterotrophic Bacteria and Diatoms.Frontiers in microbiology · 2016Article
Corrections and comments
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Authors and funding
5 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Diatoms often inhabit highly variable habitats where they are confronted with a wide variety of stresses, frequently including starvation of nutrients such as nitrogen. In this study, the transcriptome of the model diatom Phaeodactylum tricornutum was profiled during the onset of nitrogen starvation by RNA sequencing, and overrepresented motifs were determined in promoters of genes that were early and strongly up-regulated during the nitrogen stress response. One of these motifs could be bound by a nitrogen starvation-inducible RING-domain protein termed RING-GAF-Gln-containing protein (RGQ1), which was shown to act as a transcription factor and belongs to a previously uncharacterized family that is conserved in heterokont algae.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.