Evidence map›Paper›PMID 26582718›Full record

ArticleJournal of biomolecular NMR2015

The "long tail" of the protein tumbling correlation function: observation by (1)H NMR relaxometry in a wide frequency and concentration range.

Matthias Roos, Marius Hofmann, Susanne Link, Maria Ott, Jochen Balbach, Ernst Rössler, Kay Saalwächter, Alexey Krushelnitsky

Abstract read
In one paragraph

Article in Journal of biomolecular NMR, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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  4. Fast Magic-Angle-SpinningThe journal of physical chemistry. B · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Matthias RoosInstitut für Physik, Martin-Luther-Universität Halle-Wittenberg, Betty-Heimann-Str. 7, 06120, Halle, Germany.
Marius HofmannUniversität Bayreuth, Lehrstuhl Experimentalphysik II, Universitätsstr. 30, 95440, Bayreuth, Germany.
Susanne LinkInstitut für Physik, Martin-Luther-Universität Halle-Wittenberg, Betty-Heimann-Str. 7, 06120, Halle, Germany.
Maria OttInstitut für Physik, Martin-Luther-Universität Halle-Wittenberg, Betty-Heimann-Str. 7, 06120, Halle, Germany.
Jochen BalbachInstitut für Physik, Martin-Luther-Universität Halle-Wittenberg, Betty-Heimann-Str. 7, 06120, Halle, Germany.
Ernst RösslerUniversität Bayreuth, Lehrstuhl Experimentalphysik II, Universitätsstr. 30, 95440, Bayreuth, Germany.
Kay SaalwächterInstitut für Physik, Martin-Luther-Universität Halle-Wittenberg, Betty-Heimann-Str. 7, 06120, Halle, Germany. kay.saalwaechter@physik.uni-halle.de.
Alexey KrushelnitskyInstitut für Physik, Martin-Luther-Universität Halle-Wittenberg, Betty-Heimann-Str. 7, 06120, Halle, Germany. krushelnitsky@physik.uni-halle.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inter-protein interactions in solution affect the auto-correlation function of Brownian tumbling not only in terms of a simple increase of the correlation time, they also lead to the appearance of a weak slow component ("long tail") of the correlation function due to a slowly changing local anisotropy of the microenvironment. The conventional protocol of correlation time estimation from the relaxation rate ratio R1/R2 assumes a single-component tumbling correlation function, and thus can provide incorrect results as soon as the "long tail" is of relevance. This effect, however, has been underestimated in many instances. In this work we present a detailed systematic study of the tumbling correlation function of two proteins, lysozyme and bovine serum albumin, at different concentrations and temperatures using proton field-cycling relaxometry combined with R1ρ and R2 measurements. Unlike high-field NMR relaxation methods, these techniques enable a detailed study of dynamics on a time scale longer than the normal protein tumbling correlation time and, thus, a reliable estimate of the parameters of the "long tail". In this work we analyze the concentration dependence of the intensity and correlation time of the slow component and perform simulations of high-field (15)N NMR relaxation data demonstrating the importance of taking the "long tail" in the analysis into account.

Indexed as

AnimalsAvian ProteinsChickensDeuterium OxideMuramidaseNuclear Magnetic Resonance, BiomolecularProtein ConformationSolutionsSolventsAvian ProteinsDeuterium OxideMuramidaseSolutionsSolventsBrownian tumblingCorrelation functionField-cyclingInter-protein interactionsRelaxation

Identifiers

PMID26582718
PMCPMC4662726

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.