Evidence map›Paper›PMID 26582551›Full record

ArticleMicrobes and environments2015

The Type III Secretion System (T3SS) is a Determinant for Rice-Endophyte Colonization by Non-Photosynthetic Bradyrhizobium.

Pongdet Piromyou, Pongpan Songwattana, Teerana Greetatorn, Takashi Okubo, Kaori Chiba Kakizaki, Janpen Prakamhang, Panlada Tittabutr, Nantakorn Boonkerd, Neung Teaumroong, Kiwamu Minamisawa

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. CopGBiology · 2024
    Article
  3. Article
  4. Review
  5. Review
  6. The Type IV Secretion System (T4SS) Mediates Symbiosis betweenApplied and environmental microbiology · 2023
    Article
  7. Frontiers in plant science · 2023
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. A Genomotaxonomy View of theFrontiers in microbiology · 2019
    Article
  20. Identification of Nitrogen-FixingFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Pongdet PiromyouSchool of Biotechnology, Institute of Agricultural Technology, Suranaree University of Technology.
Pongpan Songwattana
Teerana Greetatorn
Takashi Okubo
Kaori Chiba Kakizaki
Janpen Prakamhang
Panlada Tittabutr
Nantakorn Boonkerd
Neung Teaumroong
Kiwamu Minamisawa
Biotechnology Institute · USSuranaree University of Technology · THTohoku University · JPRajamangala University of Technology Isan · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant associations by bradyrhizobia have been detected not only in leguminous plants, but also in non-leguminous species including rice. Bradyrhizobium sp. SUTN9-2 was isolated from Aeschynomene americana L., which is a leguminous weed found in the rice fields of Thailand. This strain promoted the highest total rice (Oryza sativa L. cultivar Pathum Thani 1) dry weight among the endophytic bradyrhizobial strains tested, and was, thus, employed for the further characterization of rice-Bradyrhizobium interactions. Some known bacterial genes involved in bacteria-plant interactions were selected. The expression of the type III secretion component (rhcJ), type IV secretion component (virD4), and pectinesterase (peces) genes of the bacterium were up-regulated when the rice root exudate was added to the culture. When SUTN9-2 was inoculated into rice seedlings, the peces, rhcJ, virD4, and exopolysaccharide production (fliP) genes were strongly expressed in the bacterium 6-24 h after the inoculation. The gene for glutathione-S-transferase (gst) was slightly expressed 12 h after the inoculation. In order to determine whether type III secretion system (T3SS) is involved in bradyrhizobial infections in rice plants, wild-type SUTN9-2 and T3SS mutant strains were inoculated into the original host plant (A. americana) and a rice plant (cultivar Pathum Thani 1). The ability of T3SS mutants to invade rice tissues was weaker than that of the wild-type strain; however, their phenotypes in A. americana were not changed by T3SS mutations. These results suggest that T3SS is one of the important determinants modulating rice infection; however, type IV secretion system and peces may also be responsible for the early steps of rice infection.

Indexed as

SymbiosisType III Secretion SystemsBradyrhizobiumEndocytosisEndophytesFabaceaeGene DeletionOryzaThailandType III Secretion Systems

Identifiers

PMID26582551
PMCPMC4676552
OpenAlexW2178800449

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.