Evidence map›Paper›PMID 26582391›Full record

ArticleMolecular biology of the cell2016

TORC1 and TORC2 work together to regulate ribosomal protein S6 phosphorylation in Saccharomyces cerevisiae.

Seda Yerlikaya, Madeleine Meusburger, Romika Kumari, Alexandre Huber, Dorothea Anrather, Michael Costanzo, Charles Boone, Gustav Ammerer, Pavel V Baranov, Robbie Loewith

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 92 citations in OpenAlex.

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  6. Review
  7. Circadian Control of Protein Synthesis.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
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  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. TOR Complex 1: Orchestrating Nutrient Signaling and Cell Cycle Progression.International journal of molecular sciences · 2023
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Seda YerlikayaDepartment of Molecular Biology and Institute of Genetics and Genomics of Geneva, University of Geneva, CH-1211 Geneva, Switzerland.
Madeleine MeusburgerDepartment of Molecular Biology and Institute of Genetics and Genomics of Geneva, University of Geneva, CH-1211 Geneva, Switzerland.
Romika KumariSchool of Biochemistry and Cell Biology, University College Cork, Cork, Ireland.
Alexandre HuberDepartment of Molecular Biology and Institute of Genetics and Genomics of Geneva, University of Geneva, CH-1211 Geneva, Switzerland.
Dorothea AnratherMax F. Perutz Laboratories, Department of Biochemistry, University of Vienna, A1030 Vienna, Austria.
Michael CostanzoBanting and Best Department of Medical Research, Donnelly Center for Cellular and Biomolecular Research, University of Toronto, Toronto, ON M5S 3E1, Canada.
Charles BooneBanting and Best Department of Medical Research, Donnelly Center for Cellular and Biomolecular Research, University of Toronto, Toronto, ON M5S 3E1, Canada.
Gustav AmmererMax F. Perutz Laboratories, Department of Biochemistry, University of Vienna, A1030 Vienna, Austria.
Pavel V BaranovSchool of Biochemistry and Cell Biology, University College Cork, Cork, Ireland.
Robbie LoewithDepartment of Molecular Biology and Institute of Genetics and Genomics of Geneva, University of Geneva, CH-1211 Geneva, Switzerland Swiss National Centre for Competence in Research Programme Chemical Biology, 1211 Geneva, Switzerland robbie.loewith@unige.ch.
University of Geneva · CHUniversity College Cork · IEUniversity of Toronto · CAUniversity of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nutrient-sensitive phosphorylation of the S6 protein of the 40S subunit of the eukaryote ribosome is highly conserved. However, despite four decades of research, the functional consequences of this modification remain unknown. Revisiting this enigma in Saccharomyces cerevisiae, we found that the regulation of Rps6 phosphorylation on Ser-232 and Ser-233 is mediated by both TOR complex 1 (TORC1) and TORC2. TORC1 regulates phosphorylation of both sites via the poorly characterized AGC-family kinase Ypk3 and the PP1 phosphatase Glc7, whereas TORC2 regulates phosphorylation of only the N-terminal phosphosite via Ypk1. Cells expressing a nonphosphorylatable variant of Rps6 display a reduced growth rate and a 40S biogenesis defect, but these phenotypes are not observed in cells in which Rps6 kinase activity is compromised. Furthermore, using polysome profiling and ribosome profiling, we failed to uncover a role of Rps6 phosphorylation in either global translation or translation of individual mRNAs. Taking the results together, this work depicts the signaling cascades orchestrating Rps6 phosphorylation in budding yeast, challenges the notion that Rps6 phosphorylation plays a role in translation, and demonstrates that observations made with Rps6 knock-ins must be interpreted cautiously.

Indexed as

Mechanistic Target of Rapamycin Complex 1Mechanistic Target of Rapamycin Complex 2Multiprotein ComplexesPhosphorylationPolyribosomesProtein Serine-Threonine KinasesRibosomal Protein S6RibosomesRibosome Subunits, Small, EukaryoticSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionTOR Serine-Threonine KinasesTranscription FactorsMechanistic Target of Rapamycin Complex 1Mechanistic Target of Rapamycin Complex 2Multiprotein ComplexesProtein Serine-Threonine KinasesRibosomal Protein S6Saccharomyces cerevisiae ProteinsTORC1 protein complex, S cerevisiaeTOR Serine-Threonine KinasesTranscription Factors

Identifiers

PMID26582391
PMCPMC4713140
OpenAlexW2339791791

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.