Evidence map›Paper›PMID 26582389›Full record

ArticleMolecular biology of the cell2016

Arl13b and the exocyst interact synergistically in ciliogenesis.

Cecília Seixas, Soo Young Choi, Noemi Polgar, Nicole L Umberger, Michael P East, Xiaofeng Zuo, Hugo Moreiras, Rania Ghossoub, Alexandre Benmerah, Richard A Kahn and 4 more

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 88 citations in OpenAlex.

  1. Broadening horizons: Pathogenesis and therapeutics of renal ciliopathies.Journal of cell communication and signaling · 2026
    Review
  2. Article
  3. Review
  4. The exocyst in ciliogenesis.Renal failure · 2025
    Review
  5. Article
  6. Article
  7. Intracellular and Extracellular Vesicle miRNA Signatures in Human iPSC-Derived Neural Stem Cells and Floor Plate Progenitors.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  8. ARL13B-Cerulean rescuesbioRxiv : the preprint server for biology · 2025
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Membrane trafficking alterations in breast cancer progression.Frontiers in cell and developmental biology · 2024
    Review
  18. Article
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Cecília SeixasCEDOC, NOVA Medical School/Faculdade de Ciências Médicas, Universidade Nova de Lisboa, 1169-056 Lisbon, Portugal duarte.barral@nms.unl.pt cecilia.seixas@nms.unl.pt.
Soo Young ChoiDepartment of Medicine, Medical University of South Carolina, Charleston, SC 29425.
Noemi PolgarDepartment of Anatomy, Biochemistry, and Physiology, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI 96813.
Nicole L UmbergerDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA 30022.
Michael P EastDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30022.
Xiaofeng ZuoDepartment of Medicine, Medical University of South Carolina, Charleston, SC 29425.
Hugo MoreirasCEDOC, NOVA Medical School/Faculdade de Ciências Médicas, Universidade Nova de Lisboa, 1169-056 Lisbon, Portugal.
Rania GhossoubCentre de Recherche en Cancérologie de Marseille, INSERM, UMR7258, 13009 Marseille, France.
Alexandre BenmerahINSERM UMR 1163, Laboratory of Inherited Kidney Diseases, 75015 Paris, France Paris Descartes-Sorbonne Paris Cité University, Imagine Institute, 75015 Paris, France.
Richard A KahnDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA 30022.
Ben FogelgrenDepartment of Anatomy, Biochemistry, and Physiology, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, HI 96813.
Tamara CasparyDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA 30022.
Joshua H LipschutzDepartment of Medicine, Medical University of South Carolina, Charleston, SC 29425 Department of Medicine, RHJ Veterans Affairs Medical Center, Charleston, SC 29425.
Duarte C BarralCEDOC, NOVA Medical School/Faculdade de Ciências Médicas, Universidade Nova de Lisboa, 1169-056 Lisbon, Portugal duarte.barral@nms.unl.pt cecilia.seixas@nms.unl.pt.
Emory University · USMedical University of South Carolina · USUniversidade Nova de Lisboa · PTUniversity of Hawaiʻi at Mānoa · USCentre de Recherche en Cancérologie de Marseille · FRSorbonne Paris Cité · FR

Funding

UAB Recessive PKD Research and Translational Core CenterP30DK074038 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YODER, BRADLEY K. · 2005 to 2019
$16.6M
RESEARCH DESIGN, BIOSTATISTICS AND RESEARCH ETHICS COREG12MD007601 · NIMHD · UNIVERSITY OF HAWAII AT MANOA · PI BERRY, MARLA J · 2012 to 2016
$13.0M
Transgenic Mouse, ICSI and IVF CoreP20GM103457 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI WARD, WILLIAM S · 2012 to 2018
$12.9M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008490 · NIGMS · EMORY UNIVERSITY · PI BOSS, JEREMY M. · 1993 to 2022
$8.0M
Molecular Mechanisms and Genetics of AutoimmunityP20GM103456 · NIGMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI GAFFNEY, PATRICK M · 2012 to 2013
$4.8M
The Regulation and Cellular Activities of the ARL2 GTPaseR01GM090158 · NIGMS · EMORY UNIVERSITY · PI KAHN, RICHARD A · 2010 to 2017
$2.5M
Biology of the ARL13B GTPaseR01GM110663 · NIGMS · EMORY UNIVERSITY · PI CASPARY, TAMARA J., KAHN, RICHARD A · 2014 to 2017
$1.7M
The role of mouse ARL13B in cell diversification during spinal cord developmentR01NS056380 · NINDS · EMORY UNIVERSITY · PI CASPARY, TAMARA J. · 2007 to 2010
$1.5M
Training Program in Human Disease GeneticsT32MH087977 · NIMH · EMORY UNIVERSITY · PI WARREN, STEPHEN T. · 2009 to 2013
$1.3M
The Exocyst in Synthesis, Cystogenesis and TubulogenesisR01DK069909 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LIPSCHUTZ, JOSHUA H · 2005 to 2009
$1.3M
The exocyst in kidney development and cyst formationK01DK087852 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI FOGELGREN, BENJAMIN C. · 2010 to 2014
$764k
Gene Expression Changes in Early 3D Renal TubulogenesisR21DK070980 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LIPSCHUTZ, JOSHUA H · 2006 to 2007
$310k
BLRD VA I01 BX000820NIDDK NIH HHS 1K01DK087852NIDDK NIH HHS 5P30DK074038NIDDK NIH HHS DK069909NIDDK NIH HHS DK070980NIDDK NIH HHS K01 DK087852NIDDK NIH HHS P30 DK074038NIDDK NIH HHS R01 DK069909NIDDK NIH HHS R03 DK100738NIDDK NIH HHS R03DK100738NIDDK NIH HHS R21 DK070980NIGMS NIH HHS GM090158NIGMS NIH HHS P20GM103456-06A1-8293NIGMS NIH HHS P20 GM103457NIGMS NIH HHS R01 GM090158NIGMS NIH HHS R01 GM110663NIGMS NIH HHS T32 GM008490NIGMS NIH HHS T32GM008490NIMHD NIH HHS 5G12MD007601NIMHD NIH HHS G12 MD007601NIMH NIH HHS T32 MH087977NIMH NIH HHS T32MH087977NINDS NIH HHS R01 NS056380
6 · The paper itself

Abstract

Arl13b belongs to the ADP-ribosylation factor family within the Ras superfamily of regulatory GTPases. Mutations in Arl13b cause Joubert syndrome, which is characterized by congenital cerebellar ataxia, hypotonia, oculomotor apraxia, and mental retardation. Arl13b is highly enriched in cilia and is required for ciliogenesis in multiple organs. Nevertheless, the precise role of Arl13b remains elusive. Here we report that the exocyst subunits Sec8, Exo70, and Sec5 bind preferentially to the GTP-bound form of Arl13b, consistent with the exocyst being an effector of Arl13b. Moreover, we show that Arl13b binds directly to Sec8 and Sec5. In zebrafish, depletion of arl13b or the exocyst subunit sec10 causes phenotypes characteristic of defective cilia, such as curly tail up, edema, and abnormal pronephric kidney development. We explored this further and found a synergistic genetic interaction between arl13b and sec10 morphants in cilia-dependent phenotypes. Through conditional deletion of Arl13b or Sec10 in mice, we found kidney cysts and decreased ciliogenesis in cells surrounding the cysts. Moreover, we observed a decrease in Arl13b expression in the kidneys from Sec10 conditional knockout mice. Taken together, our results indicate that Arl13b and the exocyst function together in the same pathway leading to functional cilia.

Indexed as

Abnormalities, MultipleADP-Ribosylation FactorsAnimalsCerebellumCiliaEye AbnormalitiesGenetic Association StudiesHeLa CellsHumansKidneyKidney Diseases, CysticMiceMice, KnockoutMicrotubulesMutationNIH 3T3 CellsADP-Ribosylation FactorsARL13B protein, humanArl13b protein, mouseArl13b protein, zebrafishVesicular Transport ProteinsZebrafish Proteins

Identifiers

PMID26582389
PMCPMC4713133
OpenAlexW2262132470

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.