Evidence map›Paper›PMID 26582086›Full record

ArticleMycopathologia2016

Microsatellite Typing of Aspergillus flavus Strains in a Tunisian Onco-hematology Unit.

Soukeina Gheith, Fatma Saghrouni, Anne-Cécile Normand, Wadiaa Bannour, Abderrahim Khelif, Renaud Piarroux, Moncef Ben Said, Mansour Njah, Stéphane Ranque

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Article in Mycopathologia, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Soukeina GheithService d'Hygiène Hospitalière, CHU Farhat Hached Sousse, 4000, Sousse, Tunisia. soukeina2gheith@yahoo.fr.
Fatma SaghrouniUnité de recherche UR 12SP31, Ministère de la Santé Publique, 1006, Tunis, Tunisia.
Anne-Cécile NormandLaboratoire de Parasitologie-Mycologie, CHU Timone-Adultes, Assistance Publique-Hôpitaux de Marseille, 13005, Marseille, France.
Wadiaa BannourService d'Hygiène Hospitalière, CHU Farhat Hached Sousse, 4000, Sousse, Tunisia.
Abderrahim KhelifService d'Hématologie clinique, CHU Farhat Hached, 4000, Sousse, Tunisia.
Renaud PiarrouxLaboratoire de Parasitologie-Mycologie, CHU Timone-Adultes, Assistance Publique-Hôpitaux de Marseille, 13005, Marseille, France.
Moncef Ben SaidUnité de recherche UR 12SP31, Ministère de la Santé Publique, 1006, Tunis, Tunisia.
Mansour NjahService d'Hygiène Hospitalière, CHU Farhat Hached Sousse, 4000, Sousse, Tunisia.
Stéphane RanqueLaboratoire de Parasitologie-Mycologie, CHU Timone-Adultes, Assistance Publique-Hôpitaux de Marseille, 13005, Marseille, France.
Hôpital Farhat Hached · TNMinistère de la Santé · TNAix-Marseille Université · FRAssistance Publique Hôpitaux de Marseille · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspergillus flavus is the most common species associated with invasive aspergillosis in Tunisia. The molecular epidemiology of the species is poorly documented. We used five highly discriminative microsatellite markers for the genotyping of clinical and hospital environmental A. flavus strains to assess whether IA could be hospital-acquired in the onco-hematology unit of the Farhat Hached teaching hospital of Sousse, Tunisia. The genotyping of 18 clinical isolates, collected from sputa of 17 acute leukemia patients, and 81 isolates, collected in these patients' hospital environment and food, identified 57 isolates that were grouped in 10 clones, each of them including 2-17 isolates. The remaining 42 isolates showed a unique genotype. Two main transmission scenarios were observed: (1) the same clone was isolated from different patients; (2) the same clone was isolated from a patient, its hospital environment and/or food. These findings strongly suggest the occurrence of hospital-acquired A. flavus infection/colonization in the investigated onco-hematology unit.

Indexed as

AspergillosisAspergillus flavusBase SequenceCross InfectionGenotypeHospital UnitsHumansMicrosatellite RepeatsMolecular EpidemiologyMolecular TypingSequence Analysis, DNASpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTunisiaAspergillus flavusInvasive aspergillosisMicrosatellite markersOnco-hematologyTunisia

Identifiers

PMID26582086
OpenAlexW2280695896

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.