Evidence map›Paper›PMID 26582000›Full record

ArticleJournal of virology2016

Three-Dimensional Structural Characterization of HIV-1 Tethered to Human Cells.

Joshua D Strauss, Jason E Hammonds, Hong Yi, Lingmei Ding, Paul Spearman, Elizabeth R Wright

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Recent advances in correlative cryo-light and electron microscopy.Current opinion in structural biology · 2024
    Review
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  14. Limiting Respiratory Viral Infection by Targeting Antiviral and Immunological Functions of BST-2/Tetherin: Knowledge and Gaps.BioEssays : news and reviews in molecular, cellular and developmental biology · 2018
    Review
  15. Biological Applications at the Cutting Edge of Cryo-Electron Microscopy.Microscopy and microanalysis : the official journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada · 2018
    Review
  16. Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Joshua D StraussDepartment of Pediatrics, Emory University School of Medicine, and Children's Healthcare of Atlanta, Atlanta, Georgia, USA.
Jason E HammondsDepartment of Pediatrics, Emory University School of Medicine, and Children's Healthcare of Atlanta, Atlanta, Georgia, USA.
Hong YiRobert P. Apkarian Integrated Electron Microscopy Core, Emory University, Atlanta, Georgia, USA.
Lingmei DingDepartment of Pediatrics, Emory University School of Medicine, and Children's Healthcare of Atlanta, Atlanta, Georgia, USA.
Paul SpearmanDepartment of Pediatrics, Emory University School of Medicine, and Children's Healthcare of Atlanta, Atlanta, Georgia, USA paul.spearman@emory.edu erwrigh@emory.edu.
Elizabeth R WrightDepartment of Pediatrics, Emory University School of Medicine, and Children's Healthcare of Atlanta, Atlanta, Georgia, USA Robert P. Apkarian Integrated Electron Microscopy Core, Emory University, Atlanta, Georgia, USA paul.spearman@emory.edu erwrigh@emory.edu.
Children's Healthcare of Atlanta · USEmory University · US

Funding

Virology and Molecular Biomarkers CoreP30AI050409 · NIAID · EMORY UNIVERSITY · PI Carlos del Rio · 2002 to 2026
$74.0M
Role of VPU in Retroviral Particle AssemblyR01AI058828 · NIAID · VANDERBILT UNIVERSITY · PI SPEARMAN, PAUL W. · 2004 to 2015
$3.6M
Structural studies of respiratory syncytial virusR21AI101775 · NIAID · EMORY UNIVERSITY · PI WRIGHT, ELIZABETH R · 2013 to 2014
$429k
Structural analysis of tetherin-mediated HIV restrictionF32GM112517 · NIGMS · EMORY UNIVERSITY · PI STRAUSS, JOSHUA · 2014 to 2015
$106k
NIAID NIH HHS AI058828NIAID NIH HHS P30 AI050409NIAID NIH HHS R01 AI058828NIAID NIH HHS R01AI058828NIAID NIH HHS R21 AI101775NIGMS NIH HHS F32 GM112517NIGMS NIH HHS F32GM112517
6 · The paper itself

Abstract

unlabelledTetherin (BST2, CD317, or HM1.24) is a host cellular restriction factor that prevents the release of enveloped viruses by mechanically linking virions to the plasma membrane. The precise arrangement of tetherin molecules at the plasma membrane site of HIV-1 assembly, budding, and restriction is not well understood. To gain insight into the biophysical mechanism underlying tetherin-mediated restriction of HIV-1, we utilized cryo-electron tomography (cryo-ET) to directly visualize HIV-1 virus-like particles (VLPs) and virions tethered to human cells in three dimensions (3D). Rod-like densities that we refer to as tethers were seen connecting HIV-1 virions to each other and to the plasma membrane. Native immunogold labeling showed tetherin molecules located on HIV-1 VLPs and virions in positions similar to those of the densities observed by cryo-ET. The location of the tethers with respect to the ordered immature Gag lattice or mature conical core was random. However, tethers were not uniformly distributed on the viral membrane but rather formed clusters at sites of contact with the cell or other virions. Chains of tethered HIV-1 virions often were arranged in a linear fashion, primarily as single chains and, to a lesser degree, as branched chains. Distance measurements support the extended tetherin model, in which the coiled-coil ectodomains are oriented perpendicular with respect to the viral and plasma membranes. IMPORTANCE: Tetherin is a cellular factor that restricts HIV-1 release by directly cross-linking the virus to the host cell plasma membrane. We used cryo-electron tomography to visualize HIV-1 tethered to human cells in 3D. We determined that tetherin-restricted HIV-1 virions were physically connected to each other or to the plasma membrane by filamentous tethers that resembled rods ∼15 nm in length, which is consistent with the extended tetherin model. In addition, we found the position of the tethers to be arbitrary relative to the ordered immature Gag lattice or the mature conical cores. However, when present as multiple copies, the tethers clustered at the interface between virions. Tethered HIV-1 virions were arranged in a linear fashion, with the majority as single chains. This study advances our understanding of tetherin-mediated HIV-1 restriction by defining the spatial arrangement and orientation of tetherin molecules at sites of HIV-1 restriction.

Indexed as

Virus AttachmentVirus ReleaseAntigens, CDBiophysical PhenomenaBone Marrow Stromal Antigen 2Cell LineCell MembraneCryoelectron MicroscopyElectron Microscope TomographyGPI-Linked ProteinsHIV-1HumansVirionAntigens, CDBone Marrow Stromal Antigen 2BST2 protein, humanGPI-Linked Proteins

Identifiers

PMID26582000
PMCPMC4719611
OpenAlexW2216096160

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.