Evidence map›Paper›PMID 26581195›Full record

ArticleBMC genomics2015

Gene expression analysis at the onset of sex differentiation in turbot (Scophthalmus maximus).

Diego Robledo, Laia Ribas, Rosa Cal, Laura Sánchez, Francesc Piferrer, Paulino Martínez, Ana Viñas

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 44 citations in OpenAlex.

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  9. Sexual Development of the Hermaphroditic ScallopFrontiers in cell and developmental biology · 2021
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  10. Evolution, Expression, and Function of Gonadal Somatic Cell-Derived Factor.Frontiers in cell and developmental biology · 2021
    Review
  11. Comparative Genomics Studies on theFrontiers in genetics · 2020
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  17. Article
  18. Gonadal soma controls ovarian follicle proliferation through Gsdf in zebrafish.Developmental dynamics : an official publication of the American Association of Anatomists · 2017
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Diego RobledoDepartamento de Genética, Facultad de Biología, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain. diego.robledo@usc.es.
Laia RibasInstitut de Ciències del Mar, Consejo Superior de Investigaciones Científicas (CSIC), 08003, Barcelona, Spain. lribas@icm.csic.es.
Rosa CalInstituto Español de Oceanografía, Centro Oceanográfico de Vigo, 36390, Vigo, Spain. rosa.cal@vi.ieo.es.
Laura SánchezDepartamento de Genética. Facultad de Veterinaria, Universidade de Santiago de Compostela, Campus de Lugo, 27002, Lugo, Spain. lauraelena.sanchez@usc.es.
Francesc PiferrerInstitut de Ciències del Mar, Consejo Superior de Investigaciones Científicas (CSIC), 08003, Barcelona, Spain. piferrer@icm.csic.es.
Paulino MartínezDepartamento de Genética. Facultad de Veterinaria, Universidade de Santiago de Compostela, Campus de Lugo, 27002, Lugo, Spain. paulino.martinez@usc.es.
Ana ViñasDepartamento de Genética, Facultad de Biología, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain. anamaria.vinas@usc.es.
Universidade de Santiago de Compostela · ESConsejo Superior de Investigaciones Científicas · ESInstitut de Ciències del Mar · ESInstituto Español de Oceanografía · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundControlling sex ratios is essential for the aquaculture industry, especially in those species with sex dimorphism for relevant productive traits, hence the importance of knowing how the sexual phenotype is established in fish. Turbot, a very important fish for the aquaculture industry in Europe, shows one of the largest sexual growth dimorphisms amongst marine cultured species, being all-female stocks a desirable goal for the industry. Although important knowledge has been achieved on the genetic basis of sex determination (SD) in this species, the master SD gene remains unknown and precise information on gene expression at the critical stage of sex differentiation is lacking. In the present work, we examined the expression profiles of 29 relevant genes related to sex differentiation, from 60 up to 135 days post fertilization (dpf), when gonads are differentiating. We also considered the influence of three temperature regimes on sex differentiation.

resultsThe first sex-related differences in molecular markers could be observed at 90 days post fertilization (dpf) and so we have called that time the onset of sex differentiation. Three genes were the first to show differential expression between males and females and also allowed us to sex turbot accurately at the onset of sex differentiation (90 dpf): cyp19a1a, amh and vasa. The expression of genes related to primordial germ cells (vasa, gsdf, tdrd1) started to increase between 75-90 dpf and vasa and tdrd1 later presented higher expression in females (90-105 dpf). Two genes placed on the SD region of turbot (sox2, fxr1) did not show any expression pattern suggestive of a sex determining function. We also detected changes in the expression levels of several genes (ctnnb1, cyp11a, dmrt2 or sox6) depending on culture temperature.

conclusionOur results enabled us to identify the first sex-associated genetic cues (cyp19a1a, vasa and amh) at the initial stages of gonad development in turbot (90 dpf) and to accurately sex turbot at this age, establishing the correspondence between gene expression profiles and histological sex. Furthermore, we profiled several genes involved in sex differentiation and found specific temperature effects on their expression.

Indexed as

Gene Expression ProfilingAnimalsFemaleFertilizationFlatfishesGene Regulatory NetworksMaleQuantitative Trait LociSex DifferentiationTemperature

Identifiers

PMID26581195
PMCPMC4652359
OpenAlexW2176631886

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.