Evidence map›Paper›PMID 26580003›Full record

ArticleJournal of the American Chemical Society2015

C3-OH of Amphotericin B Plays an Important Role in Ion Conductance.

Stephen A Davis, Lisa A Della Ripa, Lingbowei Hu, Alexander G Cioffi, Taras V Pogorelov, Chad M Rienstra, Martin D Burke

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Antimicrobial agents and chemotherapy · 2019
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Stephen A DavisHoward Hughes Medical Institute, ‡Department of Chemistry, §Department of Biochemistry, ∥School of Chemical Sciences, ⊥National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.
Lisa A Della RipaHoward Hughes Medical Institute, ‡Department of Chemistry, §Department of Biochemistry, ∥School of Chemical Sciences, ⊥National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.
Lingbowei HuHoward Hughes Medical Institute, ‡Department of Chemistry, §Department of Biochemistry, ∥School of Chemical Sciences, ⊥National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.
Alexander G CioffiHoward Hughes Medical Institute, ‡Department of Chemistry, §Department of Biochemistry, ∥School of Chemical Sciences, ⊥National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.
Taras V PogorelovHoward Hughes Medical Institute, ‡Department of Chemistry, §Department of Biochemistry, ∥School of Chemical Sciences, ⊥National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.
Chad M RienstraHoward Hughes Medical Institute, ‡Department of Chemistry, §Department of Biochemistry, ∥School of Chemical Sciences, ⊥National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.
Martin D BurkeHoward Hughes Medical Institute, ‡Department of Chemistry, §Department of Biochemistry, ∥School of Chemical Sciences, ⊥National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign , Urbana, Illinois 61801, United States.
University of Illinois Urbana-Champaign · USHoward Hughes Medical Institute · USNational Center for Supercomputing Applications · US

Funding

Training Program in Chemistry-Interface with BiologyT32GM070421 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HERGENROTHER, PAUL · 2005 to 2019
$5.4M
Synthesis and Study of Amphotericin B DerivativesR01GM080436 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BURKE, MARTIN D · 2007 to 2016
$3.2M
Structures of Amphotericin-Sterol ComplexesR01GM112845 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI RIENSTRA, CHAD M · 2015 to 2018
$1.8M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM080436NIGMS NIH HHS R01GM080436NIGMS NIH HHS R01 GM112845NIGMS NIH HHS R01GM112845NIGMS NIH HHS T32 GM070421
6 · The paper itself

Abstract

Amphotericin B (AmB) is the archetype for small molecules that form ion channels in living systems and has recently been shown to replace a missing protein ion transporter and thereby restore physiology in yeast. Molecular modeling studies predict that AmB self-assembles in lipid membranes with the polyol region lining a channel interior that funnels to its narrowest region at the C3-hydroxyl group. This model predicts that modification of this functional group would alter conductance of the AmB ion channel. To test this hypothesis, the C3-hydroxyl group was synthetically deleted, and the resulting derivative, C3deoxyAmB (C3deOAmB), was characterized using multidimensional NMR experiments and single ion channel electrophysiology recordings. C3deOAmB possesses the same macrocycle conformation as AmB and retains the capacity to form transmembrane ion channels, yet the conductance of the C3deOAmB channels is 3-fold lower than that of AmB channels. Thus, the C3-hydroxyl group plays an important role in AmB ion channel conductance, and synthetic modifications at this position may provide an opportunity for further tuning of channel functions.

Indexed as

Amphotericin BAntifungal AgentsIon TransportAmphotericin BAntifungal Agents

Identifiers

PMID26580003
PMCPMC4687485
OpenAlexW2234765806

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.