Evidence map›Paper›PMID 26578966›Full record

ReviewFrontiers in physiology2015

Role of bioinformatics in establishing microRNAs as modulators of abiotic stress responses: the new revolution.

Anita Tripathi, Kavita Goswami, Neeti Sanan-Mishra

Abstract readReview
In one paragraph

Review in Frontiers in physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Overview of microRNA-199a Regulation in Cancer.Cancer management and research · 2019
    Review
  9. Review
  10. Review
  11. Identification and comparative analysis of microRNAs from tomato varieties showing contrasting response to ToLCV infections.Physiology and molecular biology of plants : an international journal of functional plant biology · 2018
    Article
  12. Review
  13. Article
  14. ARMOUR - A Rice miRNA: mRNA Interaction Resource.Frontiers in plant science · 2018
    Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anita TripathiPlant Molecular Biology Group, International Centre for Genetic Engineering and Biotechnology New Delhi, India.
Kavita GoswamiPlant Molecular Biology Group, International Centre for Genetic Engineering and Biotechnology New Delhi, India.
Neeti Sanan-MishraPlant Molecular Biology Group, International Centre for Genetic Engineering and Biotechnology New Delhi, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

microRNAs (miRs) are a class of 21-24 nucleotide long non-coding RNAs responsible for regulating the expression of associated genes mainly by cleavage or translational inhibition of the target transcripts. With this characteristic of silencing, miRs act as an important component in regulation of plant responses in various stress conditions. In recent years, with drastic change in environmental and soil conditions different type of stresses have emerged as a major challenge for plants growth and productivity. The identification and profiling of miRs has itself been a challenge for research workers given their small size and large number of many probable sequences in the genome. Application of computational approaches has expedited the process of identification of miRs and their expression profiling in different conditions. The development of High-Throughput Sequencing (HTS) techniques has facilitated to gain access to the global profiles of the miRs for understanding their mode of action in plants. Introduction of various bioinformatics databases and tools have revolutionized the study of miRs and other small RNAs. This review focuses the role of bioinformatics approaches in the identification and study of the regulatory roles of plant miRs in the adaptive response to stresses.

Indexed as

abiotic stressbioinformatic approacheddegradomehigh-throughput sequencingmicroarraymicroRNANGS

Identifiers

PMID26578966
PMCPMC4620411

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.