Evidence map›Paper›PMID 26578876›Full record

ArticleFrontiers in molecular neuroscience2015

Dendritic targeting of short and long 3' UTR BDNF mRNA is regulated by BDNF or NT-3 and distinct sets of RNA-binding proteins.

Annalisa Vicario, Andrea Colliva, Antonia Ratti, Laetitia Davidovic, Gabriele Baj, Łukasz Gricman, Claudia Colombrita, Alberto Pallavicini, Kevin R Jones, Barbara Bardoni and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in molecular neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 45 citations in OpenAlex.

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  8. Transcriptome-scale methods for uncovering subcellular RNA localization mechanisms.Biochimica et biophysica acta. Molecular cell research · 2022
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  17. 3'UTRs Regulate Mouse Ntrk2 mRNA Distribution in Cortical Neurons.Journal of molecular neuroscience : MN · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Annalisa VicarioDepartment of Life Sciences, University of Trieste Trieste, Italy.
Andrea CollivaDepartment of Life Sciences, University of Trieste Trieste, Italy.
Antonia RattiLaboratory of Neuroscience - IRCCS Istituto Auxologico Italiano Milano, Italy ; Department of Pathophysiology and Transplantation, "Dino Ferrari Center", Università degli Studi di Milano Milano, Italy.
Laetitia DavidovicINSERM, IPMC - CNRS, UMR 7275 Valbonne, France.
Gabriele BajDepartment of Life Sciences, University of Trieste Trieste, Italy.
Łukasz GricmanDepartment of Life Sciences, University of Trieste Trieste, Italy.
Claudia ColombritaLaboratory of Neuroscience - IRCCS Istituto Auxologico Italiano Milano, Italy ; Department of Pathophysiology and Transplantation, "Dino Ferrari Center", Università degli Studi di Milano Milano, Italy.
Alberto PallaviciniDepartment of Life Sciences, University of Trieste Trieste, Italy.
Kevin R JonesDepartment of Molecular Cellular and Developmental Biology, University of Colorado, Boulder CO, USA.
Barbara BardoniINSERM, IPMC - CNRS, UMR 7275 Valbonne, France.
Enrico TongiorgiDepartment of Life Sciences, University of Trieste Trieste, Italy.
University of Trieste · ITCentre National de la Recherche Scientifique · FRInserm · FRIRCCS Istituto Auxologico Italiano · ITIstituti di Ricovero e Cura a Carattere Scientifico · ITUniversity of Colorado Boulder · US

Funding

BDNF Roles in Regulating Cortical Dendrite StructureR01EY014998 · NEI · UNIVERSITY OF COLORADO AT BOULDER · PI JONES, KEVIN ROBERT · 2004 to 2008
$1.6M
NEI NIH HHS R01 EY014998
6 · The paper itself

Abstract

Sorting of mRNAs in neuronal dendrites relies upon inducible transport mechanisms whose molecular bases are poorly understood. We investigated here the mechanism of inducible dendritic targeting of rat brain-derived neurotrophic factor (BDNF) mRNAs as a paradigmatic example. BDNF encodes multiple mRNAs with either short or long 3' UTR, both hypothesized to harbor inducible dendritic targeting signals. However, the mechanisms of sorting of the two 3' UTR isoforms are controversial. We found that dendritic localization of BDNF mRNAs with short 3' UTR was induced by depolarization and NT3 in vitro or by seizures in vivo and required CPEB-1, -2 and ELAV-2, -4. Dendritic targeting of long 3' UTR was induced by activity or BDNF and required CPEB-1 and the relief of soma-retention signals mediated by ELAV-1, -3, -4, and FXR proteins. Thus, long and short 3' UTRs, by using different sets of RNA-binding proteins provide a mechanism of selective targeting in response to different stimuli which may underlay distinct roles of BDNF variants in neuronal development and plasticity.

Indexed as

brain-derived neurotrophic factordendritesFragile-XhippocampusneurotrophinsRNA binding proteinsRNA transport

Identifiers

PMID26578876
PMCPMC4624863
OpenAlexW2178006274

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.