Evidence map›Paper›PMID 26578796›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Reduced DOCK4 expression leads to erythroid dysplasia in myelodysplastic syndromes.

Sriram Sundaravel, Ryan Duggan, Tushar Bhagat, David L Ebenezer, Hui Liu, Yiting Yu, Matthias Bartenstein, Madhu Unnikrishnan, Subhradip Karmakar, Ting-Chun Liu and 14 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Fundamental research · 2023
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  3. Article
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  7. Review
  8. Review
  9. Article
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  11. Loss of Function of DOCK4 in Myelodysplastic Syndromes Stem Cells is Restored by Inhibitors of DOCK4 Signaling Networks.Clinical cancer research : an official journal of the American Association for Cancer Research · 2019
    Article
  12. Article
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  15. Article
  16. Article
  17. High expression ofOncotarget · 2017
    Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 6 institutions in 2 countries.

Sriram SundaravelDepartment of Medicine, The University of Chicago, Chicago, IL 60637;
Ryan DugganDepartment of Medicine, The University of Chicago, Chicago, IL 60637;
Tushar BhagatDepartment of Medicine, Albert Einstein College of Medicine, Bronx, NY 10461;
David L EbenezerDepartment of Medicine, The University of Chicago, Chicago, IL 60637;
Hui LiuDepartment of Medicine, The University of Chicago, Chicago, IL 60637;
Yiting YuDepartment of Medicine, Albert Einstein College of Medicine, Bronx, NY 10461;
Matthias BartensteinDepartment of Medicine, Albert Einstein College of Medicine, Bronx, NY 10461;
Madhu UnnikrishnanDepartment of Medicine, Albert Einstein College of Medicine, Bronx, NY 10461;
Subhradip KarmakarDepartment of Medicine, The University of Chicago, Chicago, IL 60637;
Ting-Chun LiuDepartment of Surgery, Weill Cornell Medical College, New York, NY 10065;
Ingrid TorregrozaDepartment of Surgery, Weill Cornell Medical College, New York, NY 10065;
Thomas QuenonDepartment of Surgery, Weill Cornell Medical College, New York, NY 10065;
John AnastasiDepartment of Medicine, The University of Chicago, Chicago, IL 60637;
Kathy L McGrawMoffitt Cancer Center, Tampa, FL 33612;
Andrea PellagattiRadcliffe Department of Medicine, University of Oxford, Oxford OX3 9DU, United Kingdom;
Jacqueline BoultwoodRadcliffe Department of Medicine, University of Oxford, Oxford OX3 9DU, United Kingdom;
Vijay YajnikMassachusetts General Hospital, Boston, MA 02114.
Andrew ArtzDepartment of Medicine, The University of Chicago, Chicago, IL 60637;
Michelle M Le BeauDepartment of Medicine, The University of Chicago, Chicago, IL 60637;
Ulrich SteidlDepartment of Medicine, Albert Einstein College of Medicine, Bronx, NY 10461;
Alan F ListMoffitt Cancer Center, Tampa, FL 33612;
Todd EvansDepartment of Surgery, Weill Cornell Medical College, New York, NY 10065; tre2003@med.cornell.edu amit.verma@einstein.yu.edu awickrem@medicine.bsd.uchicago.edu.
Amit VermaDepartment of Medicine, Albert Einstein College of Medicine, Bronx, NY 10461; tre2003@med.cornell.edu amit.verma@einstein.yu.edu awickrem@medicine.bsd.uchicago.edu.
Amittha WickremaDepartment of Medicine, The University of Chicago, Chicago, IL 60637; tre2003@med.cornell.edu amit.verma@einstein.yu.edu awickrem@medicine.bsd.uchicago.edu.
University of Chicago · USAlbert Einstein College of Medicine · USCornell University · USMoffitt Cancer Center · USUniversity of Oxford · GBMassachusetts General Hospital · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI STEVEN C. ALMO · 1985 to 2026
$111.2M
Re-Engineering Translational Research at the University of ChicagoUL1TR000430 · NCATS · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2012 to 2016
$20.2M
UCCRC--ETIOLOGY OF TREATMENT-INDUCED SECONDARY LEUKEMIAP01CA040046 · NCI · UNIVERSITY OF CHICAGO · PI LARSON, RICHARD A · 1985 to 2012
$19.9M
Regulation of Embryonic Erythropoiesis by BMP SignalingR37HL056182 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI EVANS, TODD R · 2009 to 2016
$3.2M
Role of a Novel Homeobox Transcription Factor (HLX) in Acute Myeloid LeukemiaR01CA166429 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI STEIDL, ULRICH · 2013 to 2017
$1.9M
The role of Dock4 in normal and aberrant erythropoiesisR01HL116336 · NHLBI · UNIVERSITY OF CHICAGO · PI VERMA, AMIT K., WICKREMA, AMITTHA · 2012 to 2015
$1.6M
Therapeutic targeting of MicroRNA-21 in Myelodysplastic syndromesR01DK103961 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI VERMA, AMIT K. · 2014 to 2017
$1.4M
NEGATIVE CELL CYCLE REGULATION IN CARDIAC MUSCLE CELLSR29HL056183 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZHU, HONG · 1997 to 1997
–
NCATS NIH HHS UL1 TR000430NCI NIH HHS CA40046NCI NIH HHS P01 CA040046NCI NIH HHS P30 CA013330NCI NIH HHS R01 CA166429NHLBI NIH HHS HL056183NHLBI NIH HHS HL16336NHLBI NIH HHS R01 HL116336NHLBI NIH HHS R37 HL056182NIDDK NIH HHS R01 DK103961
6 · The paper itself

Abstract

Anemia is the predominant clinical manifestation of myelodysplastic syndromes (MDS). Loss or deletion of chromosome 7 is commonly seen in MDS and leads to a poor prognosis. However, the identity of functionally relevant, dysplasia-causing, genes on 7q remains unclear. Dedicator of cytokinesis 4 (DOCK4) is a GTPase exchange factor, and its gene maps to the commonly deleted 7q region. We demonstrate that DOCK4 is underexpressed in MDS bone marrow samples and that the reduced expression is associated with decreased overall survival in patients. We show that depletion of DOCK4 levels leads to erythroid cells with dysplastic morphology both in vivo and in vitro. We established a novel single-cell assay to quantify disrupted F-actin filament network in erythroblasts and demonstrate that reduced expression of DOCK4 leads to disruption of the actin filaments, resulting in erythroid dysplasia that phenocopies the red blood cell (RBC) defects seen in samples from MDS patients. Reexpression of DOCK4 in -7q MDS patient erythroblasts resulted in significant erythropoietic improvements. Mechanisms underlying F-actin disruption revealed that DOCK4 knockdown reduces ras-related C3 botulinum toxin substrate 1 (RAC1) GTPase activation, leading to increased phosphorylation of the actin-stabilizing protein ADDUCIN in MDS samples. These data identify DOCK4 as a putative 7q gene whose reduced expression can lead to erythroid dysplasia.

Indexed as

Gene Expression RegulationActinsAdducinsAnimalsCalmodulin-Binding ProteinsErythroblastsFemaleGTPase-Activating ProteinsHumansMaleMyelodysplastic Syndromesrac1 GTP-Binding ProteinZebrafishZebrafish ProteinsActinsAdducinsCalmodulin-Binding ProteinsDOCK4 protein, humanGTPase-Activating Proteinsrac1 GTP-Binding ProteinRAC1 protein, humanZebrafish ProteinsactinDOCK4erythroidMDSsignaling

Identifiers

PMID26578796
PMCPMC4655581
OpenAlexW1959248044

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.