Evidence map›Paper›PMID 26575972›Full record

ArticleAmerican journal of respiratory and critical care medicine2016

Oxidative Modifications of Protein Tyrosyl Residues Are Increased in Plasma of Human Subjects with Interstitial Lung Disease.

Subramaniam Pennathur, Anuradha Vivekanandan-Giri, Morgan L Locy, Tejaswini Kulkarni, Degui Zhi, Lixia Zeng, Jaeman Byun, Joao A de Andrade, Victor J Thannickal

Open access · greenAbstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Di-Tyrosine Crosslinking andAntioxidants (Basel, Switzerland) · 2021
    Article
  5. Review
  6. Article
  7. Review
  8. Mechanisms for the Resolution of Organ Fibrosis.Physiology (Bethesda, Md.) · 2019
    Review
  9. TMT-Based Quantitative Proteomics Analysis Reveals Airborne PMInternational journal of environmental research and public health · 2018
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Update in Interstitial Lung Disease 2016.American journal of respiratory and critical care medicine · 2017
    Article
  15. Observational
  16. Review
  17. Review
  18. PM2.5 inducing myocardial fibrosis mediated by Ang II/ERK1/2/TGF-βJournal of the renin-angiotensin-aldosterone system : JRAAS
    Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Subramaniam Pennathur1 Division of Nephrology.
Anuradha Vivekanandan-Giri1 Division of Nephrology.
Morgan L Locy3 Division of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, and.
Tejaswini Kulkarni3 Division of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, and.
Degui Zhi4 Department of Biostatistics, University of Alabama, Birmingham, Alabama.
Lixia Zeng1 Division of Nephrology.
Jaeman Byun1 Division of Nephrology.
Joao A de Andrade3 Division of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, and.
Victor J Thannickal3 Division of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, and.
Pulmonary and Allergy Associates · USUniversity of Alabama at Birmingham · USUniversity of Michigan · US

Funding

Pilot and Feasibility (P and F) ProgramP30DK089503 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Joyce Lee · 2010 to 2026
$20.3M
Therapeutic Targeting of the Myofibroblast in Fibrotic Lung DiseaseP01HL114470 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI THANNICKAL, VICTOR J. · 2013 to 2022
$17.8M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008361 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YACOUBIAN, TALENE ALENE · 1992 to 2024
$16.8M
Statistics and Bioinformatics Core - WangU24DK097153 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BURANT, CHARLES F · 2012 to 2017
$10.1M
Myofibroblast Senescence in Pulmonary FibrosisR01AG046210 · NIA · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI THANNICKAL, VICTOR J. · 2014 to 2018
$1.6M
Mass Spectrometry-Based Biomarker DiscoveryR01HL094230 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PENNATHUR, SUBRAMANIAM, THANNICKAL, VICTOR J. · 2009 to 2012
$1.5M
NHLBI NIH HHS P01 HL114470NHLBI NIH HHS R01 HL094230NIA NIH HHS R01 AG046210NIDDK NIH HHS P30 DK089503NIDDK NIH HHS P30 DK89503NIDDK NIH HHS U24 DK097153NIGMS NIH HHS T32 GM008361
6 · The paper itself

Abstract

rationaleInterstitial lung diseases (ILDs) are associated with oxidative stress. Plasma biomarkers that are directly linked to oxidative stress responses in this disease have not been identified. Stable oxidation products of tyrosine residues in proteins may reflect the oxidative microenvironment in the lung or a systemic inflammatory state.

objectivesTo determine if levels of protein tyrosine oxidation are elevated in plasma of patients with ILD compared with an age- and sex-matched healthy control cohort.

methodsThree tyrosine oxidation products (3-chlorotyrosine, 3-nitrotyrosine, and o,o'-dityrosine) were quantified by tandem mass spectrometry in cellular models, a mouse model of injury-induced fibrosis, and in plasma of healthy control subjects and patients with ILD (n = 42 in each group). MEASUREMENTS AND MAIN

resultsPlasma levels of 3-chlorotyrosine, 3-nitrotyrosine, and o,o'-dityrosine were markedly elevated in patients with ILD compared with control subjects with receiver operating characteristic curves separating these groups of 0.872, 0.893, and 0.997, respectively. In a murine model of lung fibrosis, levels of all three oxidative tyrosine modifications were increased in plasma and lung tissue. Cellular models support a critical role for a heme peroxidase and enzymatic sources of reactive oxygen species in the generation of these oxidized products.

conclusionsWe demonstrate an increase in oxidized tyrosine moieties within proteins in the circulating plasma of patients with ILD. These data support the potential for development of oxidative stress-related biomarkers in early diagnosis, prognostication, and/or in evaluating responsiveness to emerging therapies for ILD.

Indexed as

Oxidative StressAnimalsBiomarkersCells, CulturedFemaleHumansLung Diseases, InterstitialMaleMiceMice, Inbred C57BLMiddle AgedTandem Mass SpectrometryTyrosine3-chlorotyrosine3-nitrotyrosineBiomarkersdityrosineTyrosinechlorotyrosinedityrosinemass spectrometrynitrotyrosineoxidative stress

Identifiers

PMID26575972
PMCPMC4849179
OpenAlexW2173886356

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.