Evidence map›Paper›PMID 26573524›Full record

ArticleBMC genomics2015

Dormant non-culturable Mycobacterium tuberculosis retains stable low-abundant mRNA.

Dmitriy V Ignatov, Elena G Salina, Mikhail V Fursov, Timofey A Skvortsov, Tatyana L Azhikina, Arseny S Kaprelyants

Abstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Review
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  13. Insights intoFrontiers in cellular and infection microbiology · 2025
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  14. Novel Populations ofMicroorganisms · 2024
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  15. Review
  16. Eradication of Drug-TolerantMicroorganisms · 2023
    Review
  17. Review
  18. Small RNA MTS1338 Configures a Stress Resistance Signature inInternational journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dmitriy V IgnatovShemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997, Miklukho-Maklaya 16/10, GSP-7, Moscow, Russian Federation. dima.ignatov@gmail.com.
Elena G SalinaA.N. Bakh Institute of Biochemistry, Russian Academy of Science, 119071, Leninsky prospekt 33, Build. 2, Moscow, Russian Federation. elenasalina@yandex.ru.
Mikhail V FursovA.N. Bakh Institute of Biochemistry, Russian Academy of Science, 119071, Leninsky prospekt 33, Build. 2, Moscow, Russian Federation. mikhail.fursov88@gmail.com.
Timofey A SkvortsovA.N. Bakh Institute of Biochemistry, Russian Academy of Science, 119071, Leninsky prospekt 33, Build. 2, Moscow, Russian Federation. t.skvortsov@qub.ac.uk.
Tatyana L AzhikinaShemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997, Miklukho-Maklaya 16/10, GSP-7, Moscow, Russian Federation. tatazhik@ibch.ru.
Arseny S KaprelyantsA.N. Bakh Institute of Biochemistry, Russian Academy of Science, 119071, Leninsky prospekt 33, Build. 2, Moscow, Russian Federation. arseny@inbi.ras.ru.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDormant Mycobacterium tuberculosis bacilli are believed to play an important role in latent tuberculosis infection. Previously, we have demonstrated that cultivation of M. tuberculosis in K(+)-deficient medium resulted in generation of dormant cells. These bacilli were non-culturable on solid media (a key feature of dormant M. tuberculosis in vivo) and characterized by low metabolism and tolerance to anti-tuberculosis drugs. The dormant bacteria demonstrated a high potential to reactivation after K(+) reintroduction even after prolonged persistence under rifampicin. In this work, we studied the transcriptome and stability of transcripts in persisting dormant bacilli under arrest of mRNA de novo synthesis.

resultsRNA-seq-based analysis of the dormant non-culturable population obtained under rifampicin exposure revealed a 30-50-fold decrease of the total mRNA level, indicating global transcriptional repression. However, the analysis of persisting transcripts displayed a cohort of mRNA molecules coding for biosynthetic enzymes, proteins involved in adaptation and repair processes, detoxification, and control of transcription initiation. This 'dormant transcriptome' demonstrated considerable stability during M. tuberculosis persistence and mRNA de novo synthesis arrest. On the contrary, several small non-coding RNAs showed increased abundance on dormancy. Interestingly, M. tuberculosis entry into dormancy was accompanied by the cleavage of 23S ribosomal RNA at a specific point located outside the ribosome catalytic center.

conclusionsDormant non-culturable M. tuberculosis bacilli are characterized by a global transcriptional repression. At the same time, the dormant bacilli retain low-abundant mRNAs, which are considerably stable during in vitro persistence, reflecting their readiness for translation upon early resuscitation steps. Increased abundance of non-coding RNAs on dormancy may indicate their role in the entry into and maintenance of M. tuberculosis dormant non-culturable state.

Indexed as

RNA StabilityBacterial ProteinsCulture TechniquesGene Expression ProfilingModels, BiologicalMycobacterium tuberculosisPhenotypePotassiumRNA, BacterialRNA, MessengerRNA, Ribosomal, 23SSequence Analysis, RNABacterial ProteinsPotassiumRNA, BacterialRNA, MessengerRNA, Ribosomal, 23S

Identifiers

PMID26573524
PMCPMC4647672

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.