Evidence map›Paper›PMID 26571502›Full record

ArticlePloS one2015

Virological Characteristics of Acute Hepatitis B in Eastern India: Critical Differences with Chronic Infection.

Neelakshi Sarkar, Ananya Pal, Dipanwita Das, Debraj Saha, Avik Biswas, Bhaswati Bandopadhayay, Mandira Chakraborti, Mrinmoy Ghosh, Runu Chakravarty

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Genotyping of hepatitis B virus isolates from Lahaul and Spiti district in Himachal Pradesh, India.Indian journal of gastroenterology : official journal of the Indian Society of Gastroenterology · 2018
    Article
  8. Current Scenario of Hepatitis B and Its Treatment in India.Journal of clinical and translational hepatology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Neelakshi SarkarICMR Virus Unit, Kolkata, ID & BG Hospital Campus, Kolkata, West Bengal, India.
Ananya PalICMR Virus Unit, Kolkata, ID & BG Hospital Campus, Kolkata, West Bengal, India.
Dipanwita DasICMR Virus Unit, Kolkata, ID & BG Hospital Campus, Kolkata, West Bengal, India.
Debraj SahaICMR Virus Unit, Kolkata, ID & BG Hospital Campus, Kolkata, West Bengal, India.
Avik BiswasICMR Virus Unit, Kolkata, ID & BG Hospital Campus, Kolkata, West Bengal, India.
Bhaswati BandopadhayayDepartment of Virology, Calcutta School of Tropical Medicine, Kolkata, West Bengal, India.
Mandira ChakrabortiDepartment of Virology, Calcutta School of Tropical Medicine, Kolkata, West Bengal, India.
Mrinmoy GhoshDepartment of Medicine, ID & BG Hospital Campus, Kolkata, West Bengal, India.
Runu ChakravartyICMR Virus Unit, Kolkata, ID & BG Hospital Campus, Kolkata, West Bengal, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis B Virus (HBV) manifests high genetic variability and is classifiable into ten genotypes (A-J). HBV infection can lead to variable clinical outcomes, ranging from self-limiting acute hepatitis to active chronic hepatitis, cirrhosis and hepatocellular carcinoma. The present study characterizes HBV strains circulating among patients with acute (AHB) and chronic HBV infection (CHB). Among a total of 653 HBsAg positive cases, 40 manifested acute infection. After sequencing the surface(S), basal core promoter/pre-core(BCP/PC) and the X gene regions, phylogenetic tree was constructed using MEGA4 by neighbor-joining method. Statistical robustness was established with bootstrap analysis. Nucleotide diversity was determined by Shannon entropy per site using the Entropy program of the Los Alamos National Laboratories. Analyses of acute patients revealed that HBV/D2 is the major circulating sub-genotype and commonly associated with sexual promiscuity and the age group between15-30 years. Comparison of AHB and CHB patients revealed that HBeAg positivity, ALT levels and genotype D were significantly high in AHB, whereas CHB patients were predominantly male, had a high viral load, and were commonly associated with genotype C. The frequencies of mutations in the S, BCP/PC, and X gene were low in AHB as compared to CHB. Drug resistant mutations were not detectable in the polymerase gene of AHB. Average nucleotide diversity in AHB was considerably low as compared to CHB. Further, the highest average ΔH (average difference in entropy between chronic and acute infection) was observed in the BCP/PC region implying that this region was most vulnerable to mutations upon HBV persistence, especially in case of genotype C. Additionally, among all substitutions, the A1762T and G1764A BCP mutations were the strongest indicators of chronicity. In conclusion, the study exhibits a general portrait of HBV strains circulating among acute hepatitis B patients in Eastern India and their intricate differences with chronic patients which should be useful from the clinical point of view.

Indexed as

Genetic VariationAdolescentAdultDNA, ViralFemaleGenotypeHepatitis BHepatitis B, ChronicHepatitis B Core AntigensHepatitis B virusHumansIndiaMaleMiddle AgedModels, StatisticalMolecular Sequence DataDNA, ViralHepatitis B Core AntigensNucleotides

Identifiers

PMID26571502
PMCPMC4646492

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.