Evidence map›Paper›PMID 26571404›Full record

ArticlePloS one2015

Transcriptome Analysis of Kiwifruit (Actinidia chinensis) Bark in Response to Armoured Scale Insect (Hemiberlesia lataniae) Feeding.

M Garry Hill, Kirstin V Wurms, Marcus W Davy, Elaine Gould, Andrew Allan, Nicola A Mauchline, Zhiwei Luo, Annette Ah Chee, Kate Stannard, Roy D Storey and 1 more

Abstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Integrated Use ofPlants (Basel, Switzerland) · 2019
    Article
  5. Article
  6. Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

M Garry HillThe New Zealand Institute for Plant & Food Research Limited (PFR), 412 No1 Rd RD2, Te Puke, New Zealand.
Kirstin V WurmsPlant & Food Research Limited (PFR), Private Bag 3230, Waikato Mail Centre, Hamilton, New Zealand.
Marcus W DavyThe New Zealand Institute for Plant & Food Research Limited (PFR), 412 No1 Rd RD2, Te Puke, New Zealand.
Elaine GouldPlant & Food Research Limited (PFR), Private Bag 3230, Waikato Mail Centre, Hamilton, New Zealand.
Andrew AllanPlant & Food Research Limited (PFR), Private Bag 92169, Auckland, New Zealand.
Nicola A MauchlineThe New Zealand Institute for Plant & Food Research Limited (PFR), 412 No1 Rd RD2, Te Puke, New Zealand.
Zhiwei LuoPlant & Food Research Limited (PFR), Private Bag 92169, Auckland, New Zealand.
Annette Ah CheePlant & Food Research Limited (PFR), Private Bag 3230, Waikato Mail Centre, Hamilton, New Zealand.
Kate StannardThe New Zealand Institute for Plant & Food Research Limited (PFR), 412 No1 Rd RD2, Te Puke, New Zealand.
Roy D StoreyThe New Zealand Institute for Plant & Food Research Limited (PFR), 412 No1 Rd RD2, Te Puke, New Zealand.
Erik H RikkerinkPlant & Food Research Limited (PFR), Private Bag 92169, Auckland, New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The kiwifruit cultivar Actinidia chinensis 'Hort16A' is resistant to the polyphagous armoured scale insect pest Hemiberlesia lataniae (Hemiptera: Diaspididae). A cDNA microarray consisting of 17,512 unigenes selected from over 132,000 expressed sequence tags (ESTs) was used to measure the transcriptomic profile of the A. chinensis 'Hort16A' canes in response to a controlled infestation of H. lataniae. After 2 days, 272 transcripts were differentially expressed. After 7 days, 5,284 (30%) transcripts were differentially expressed. The transcripts were grouped into 22 major functional categories using MapMan software. After 7 days, transcripts associated with photosynthesis (photosystem II) were significantly down-regulated, while those associated with secondary metabolism were significantly up-regulated. A total of 643 transcripts associated with response to stress were differentially expressed. This included biotic stress-related transcripts orthologous with pathogenesis related proteins, the phenylpropanoid pathway, NBS-LRR (R) genes, and receptor-like kinase-leucine rich repeat signalling proteins. While transcriptional studies are not conclusive in their own right, results were suggestive of a defence response involving both ETI and PTI, with predominance of the SA signalling pathway. Exogenous application of an SA-mimic decreased H. lataniae growth on A. chinensis 'Hort16A' plants in two laboratory experiments.

Indexed as

HerbivoryPlant BarkPlant ImmunityTranscriptomeActinidiaAnimalsData MiningDNA, ComplementaryExpressed Sequence TagsFemaleGene Expression ProfilingGene Expression Regulation, PlantHemipteraOligonucleotide Array Sequence AnalysisPhotosynthesisPolymerase Chain ReactionDNA, Complementary

Identifiers

PMID26571404
PMCPMC4646472

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.