Evidence map›Paper›PMID 26571219›Full record

ArticlePediatric research2016

Primary distal renal tubular acidosis: novel findings in patients studied by next-generation sequencing.

Juan Gómez, Helena Gil-Peña, Fernando Santos, Eliecer Coto, Ana Arango, Olaya Hernandez, Julián Rodríguez, Inmaculada Nadal, Virginia Cantos, Sara Chocrón and 5 more

Erratum issuedOpen access · greenAbstract read
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In one paragraph

Article in Pediatric research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Familial distal renal tubular acidosis.The Journal of international medical research · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Clinical features and genetic findings in Chinese children with distal renal tubular acidosis.International journal of clinical and experimental pathology · 2018
    Article
  10. Article
  11. [Clinical features of hereditary distal renal tubular acidosis and SLC4A1 gene mutation].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2017
    Article
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 2 countries.

Juan GómezDepartment of Molecular Genetics, Hospital Universitario Central de Asturias, Oviedo, Asturias, Spain.
Helena Gil-PeñaDepartment of Pediatrics, Hospital Universitario Central de Asturias, Oviedo, Asturias, Spain.
Fernando SantosDepartment of Pediatrics, Hospital Universitario Central de Asturias, Oviedo, Asturias, Spain.
Eliecer CotoDepartment of Molecular Genetics, Hospital Universitario Central de Asturias, Oviedo, Asturias, Spain.
Ana ArangoDepartment of Molecular Genetics, Hospital Universitario Central de Asturias, Oviedo, Asturias, Spain.
Olaya HernandezDepartment of Pediatrics, Universidad de Oviedo, Oviedo, Asturias, Spain.
Julián RodríguezDepartment of Pediatrics, Hospital Universitario Central de Asturias, Oviedo, Asturias, Spain.
Inmaculada NadalDepartment of Pediatrics, Complejo Hospitalario de Navarra, Pamplona, Navarra, Spain.
Virginia CantosDepartment of Pediatrics, Hospital Infanta Elena, Huelva, Andalucía, Spain.
Sara ChocrónDepartment of Pediatrics, Hospital Vall d`Hebron, Barcelona, Barcelona, Spain.
Inés VergaraDepartment of Pediatrics, Hospital Materno-Infantil Teresa Herrera, A Coruña, Galicia, Spain.
Álvaro MadridDepartment of Pediatrics, Hospital Vall d`Hebron, Barcelona, Barcelona, Spain.
Carlos VazquezDepartment of Molecular Genetics, Complejo Hospitalario Universitario Insular Materno Infantil, Las Palmas de Gran Canaria, Canarias, Spain.
Luz E GonzálezDepartment of Pediatrics, Fundación Cardio Infantil, Bogotá, Colombia.
Fiona BlancoDepartment of Pediatrics, IIS-Fundación Jiménez Díaz, Madrid, Madrid, Spain.
Hospital Universitario Central de Asturias · ESUniversidad de Oviedo · ESVall d'Hebron Hospital Universitari · ESComplejo Hospitalario de Navarra · ESHospital Universitario Fundación Jiménez Díaz · ESHospital Universitario Insular de Gran Canaria · ESSpanish Clinical Research Network · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrimary distal renal tubular acidosis (DRTA) is a rare disease caused by loss-of-function mutations in at least three genes (ATP6V0A4, ATP6V1B1, and SLC4A1) involved in urinary distal acidification. The next-generation sequencing (NGS) technique facilitates the search for mutations in DRTA patients and helps to characterize the genetic and clinical spectrum of the disease.

methodsTen DRTA patients were studied. They had normal serum anion gap (AG), metabolic acidosis with simultaneous positive urinary AG, and inability to maximally acidify the urine. The exons of the three genes were sequenced in two pools by ultrasequencing. Putative mutations were confirmed by corresponding Sanger sequencing of each exon.

resultsWe found 13 mutations in nine patients. ATP6V0A4: Intron16+2insA; p.R807Q; p.Q276fs; p.P395fs; Intron7-2T>C. ATP6V1B1: p.I386fs; p.R394Q. SLC4A1: p.V245M; p.R589C; p.R589H; p.G609A. One case was a compound heterozygous with a known mutation in ATP6V1B1 (p.G609R) and a pathogenic variation at SLC4A1 (p.E508K). One patient was negative for mutations.

conclusionThis study evidences that NGS is labor and cost effective for the analysis of DRTA genes. Our results show for the first time SLC4A1 gene mutations in Spanish patients and disclose that compound heterozygosity at two different genes can be responsible for DRTA.

Indexed as

Acid-Base EquilibriumAcidosisAcidosis, Renal TubularChildChild, PreschoolCost-Benefit AnalysisExonsFemaleGenetic VariationHeterozygoteHigh-Throughput Nucleotide SequencingHumansInfantInfant, NewbornMaleMutation

Identifiers

PMID26571219
OpenAlexW2413049147

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.