Evidence map›Paper›PMID 26569204›Full record

ArticleMolecules (Basel, Switzerland)2015

Functional Analysis of the Isopentenyl Diphosphate Isomerase of Salvia miltiorrhiza via Color Complementation and RNA Interference.

Xianan Zhang, Hongyu Guan, Zhubo Dai, Juan Guo, Ye Shen, Guanghong Cui, Wei Gao, Luqi Huang

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 19 citations in OpenAlex.

  1. Characteristics ofHorticulture research · 2023
    Article
  2. Article
  3. Article
  4. Diversifying Isoprenoid PlatformsFrontiers in microbiology · 2021
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Xianan ZhangSchool of Traditional Chinese Medicine, Capital Medical University, Beijing 100069, China. zhxn0609@163.com.
Hongyu GuanSchool of Traditional Chinese Medicine, Capital Medical University, Beijing 100069, China. 13716402100@139.com.
Zhubo DaiKey Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin 300308, China. dai_zb@tib.cas.cn.
Juan GuoInstitute of Chinese Materia Medica, Chinese Academy of Chinese Medical Sciences, Beijing 100700, China. guojuanzy@163.com.
Ye ShenInstitute of Chinese Materia Medica, Chinese Academy of Chinese Medical Sciences, Beijing 100700, China. shenyezy@sina.com.
Guanghong CuiInstitute of Chinese Materia Medica, Chinese Academy of Chinese Medical Sciences, Beijing 100700, China. guanghongcui@126.com.
Wei GaoSchool of Traditional Chinese Medicine, Capital Medical University, Beijing 100069, China. weigao@ccmu.edu.cn.
Luqi HuangInstitute of Chinese Materia Medica, Chinese Academy of Chinese Medical Sciences, Beijing 100700, China. huangluqi68@163.com.
Chinese Academy of Medical Sciences & Peking Union Medical College · CNCapital Medical University · CNTianjin Institute of Industrial Biotechnology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Isopentenyl diphosphate isomerase (IPI) catalyzes the isomerization between the common terpene precursor substances isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) during the terpenoid biosynthesis process. In this study, tissue expression analysis revealed that the expression level of the Salvia miltiorrhiza IPI1 gene (SmIPI1) was higher in the leaves than in the roots and stems. Furthermore, color complementation and RNA interference methods were used to verify the function of the SmIPI1 gene from two aspects. A recombinant SmIPI1 plasmid was successfully constructed and transferred into engineered E. coli for validating the function of SmIPI1 through the color difference in comparison to the control group; the observed color difference indicated that SmIPI1 served in promoting the accumulation of lycopene. Transformant hairy root lines with RNA interference of SmIPI1 were successfully constructed mediated by Agrobacterium rhizogenes ACCC 10060. RNA interference hairy roots had a severe phenotype characterized by withering, deformity or even death. The mRNA expression level of SmIPI1 in the RSi3 root line was only 8.4% of that of the wild type. Furthermore the tanshinone content was too low to be detected in the RNA interference lines. These results suggest that SmIPI1 plays a critical role in terpenoid metabolic pathways. Addition of an exogenous SmIPI1 gene promoted metabolic flow toward the biosynthesis of carotenoids in E. coli, and SmIPI1 interference in S. miltiorrhiza hairy roots may cause interruption of the 2-C-methyl-D-erythritol-4-phosphate metabolic pathway.

Indexed as

RNA InterferenceAmino Acid SequenceCarbon-Carbon Double Bond IsomerasesDNA, ComplementaryGene Expression Regulation, PlantHemiterpenesMolecular Sequence DataOrganophosphorus CompoundsOrgan SpecificityPhenotypePhylogenyPlants, Genetically ModifiedRNA, MessengerSalvia miltiorrhizaSequence AlignmentTerpenesCarbon-Carbon Double Bond IsomerasesDNA, ComplementaryHemiterpenesisopentenyldiphosphate delta-isomeraseisopentenyl pyrophosphateOrganophosphorus CompoundsRNA, MessengerTerpenescolor complementationfunctional identificationisopentenyl diphosphate isomeraseRNA interferenceSalvia miltiorrhiza

Identifiers

PMID26569204
PMCPMC6332163
OpenAlexW2136141981

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.