Evidence map›Paper›PMID 26569023›Full record

ArticleBiochemistry2015

Cholesterol-Dependent Conformational Exchange of the C-Terminal Domain of the Influenza A M2 Protein.

Sangwoo S Kim, Mary Alice Upshur, Kei Saotome, Indra D Sahu, Robert M McCarrick, Jimmy B Feix, Gary A Lorigan, Kathleen P Howard

Abstract read
In one paragraph

Article in Biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Conformation of influenza AM2 membrane protein in nanodiscs and liposomes.Biochimica et biophysica acta. Biomembranes · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Protein Amphipathic Helix Insertion: A Mechanism to Induce Membrane Fission.Frontiers in cell and developmental biology · 2019
    Review
  19. Determining Cholesterol Binding to Membrane Proteins by CholesterolJournal of the American Chemical Society · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sangwoo S KimDepartment of Chemistry and Biochemistry, Swarthmore College , Swarthmore, Pennsylvania 19081, United States.
Mary Alice UpshurDepartment of Chemistry and Biochemistry, Swarthmore College , Swarthmore, Pennsylvania 19081, United States.
Kei SaotomeDepartment of Chemistry and Biochemistry, Swarthmore College , Swarthmore, Pennsylvania 19081, United States.
Indra D SahuDepartment of Chemistry and Biochemistry, Miami University , Oxford, Ohio 45056, United States.
Robert M McCarrickDepartment of Chemistry and Biochemistry, Miami University , Oxford, Ohio 45056, United States.
Jimmy B FeixDepartment of Biophysics, National Biomedical EPR Center, Medical College of Wisconsin , Milwaukee, Wisconsin 53226, United States.
Gary A LoriganDepartment of Chemistry and Biochemistry, Miami University , Oxford, Ohio 45056, United States.
Kathleen P HowardDepartment of Chemistry and Biochemistry, Swarthmore College , Swarthmore, Pennsylvania 19081, United States.

Funding

TR&D Project 3P41EB001980 · NIBIB · MEDICAL COLLEGE OF WISCONSIN · PI KLUG, CANDICE S · 2003 to 2017
$16.3M
EPR Structural Studies of KCNE1/KCNQ1R01GM108026 · NIGMS · MIAMI UNIVERSITY OXFORD · PI LORIGAN, GARY A · 2013 to 2016
$1.3M
Conformational Studies of the Region of Influenza A M2 Protein Involved in Viral BuddingR15AI117657 · NIAID · SWARTHMORE COLLEGE · PI HOWARD, KATHLEEN P · 2015 to 2015
$327k
Adamantane Drug Binding to Membrane-Bound Influenza A M2 ProteinR15AI094483 · NIAID · SWARTHMORE COLLEGE · PI HOWARD, KATHLEEN P · 2011 to 2011
$309k
NIAID NIH HHS AI094483NIAID NIH HHS R15 AI094483NIAID NIH HHS R15 AI117657NIBIB NIH HHS P41 EB001980NIGMS NIH HHS R01 GM108026
6 · The paper itself

Abstract

The C-terminal amphipathic helix of the influenza A M2 protein plays a critical cholesterol-dependent role in viral budding. To provide atomic-level detail on the impact cholesterol has on the conformation of M2 protein, we spin-labeled sites right before and within the C-terminal amphipathic helix of the M2 protein. We studied the spin-labeled M2 proteins in membranes both with and without cholesterol. We used a multipronged site-directed spin-label electron paramagnetic resonance (SDSL-EPR) approach and collected data on line shapes, relaxation rates, accessibility of sites to the membrane, and distances between symmetry-related sites within the tetrameric protein. We demonstrate that the C-terminal amphipathic helix of M2 populates at least two conformations in POPC/POPG 4:1 bilayers. Furthermore, we show that the conformational state that becomes more populated in the presence of cholesterol is less dynamic, less membrane buried, and more tightly packed than the other state. Cholesterol-dependent changes in M2 could be attributed to the changes cholesterol induces in bilayer properties and/or direct binding of cholesterol to the protein. We propose a model consistent with all of our experimental data that suggests that the predominant conformation we observe in the presence of cholesterol is relevant for the understanding of viral budding.

Indexed as

Membranes, ArtificialModels, ChemicalCholesterolInfluenza A virusPhosphatidylcholinesPhosphatidylglycerolsProtein Structure, SecondaryProtein Structure, TertiaryViral Matrix ProteinsViroporin Proteins1-palmitoyl-2-oleoylglycero-3-phosphoglycerol1-palmitoyl-2-oleoylphosphatidylcholineCholesterolM2 protein, Influenza A virusMembranes, ArtificialPhosphatidylcholinesPhosphatidylglycerolsViral Matrix ProteinsViroporin Proteins

Identifiers

PMID26569023
PMCPMC4734095

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.