Evidence map›Paper›PMID 26568683›Full record

ArticleBiochemistry insights2015

Arabinosylation Plays a Crucial Role in Extensin Cross-linking In Vitro.

Yuning Chen, Wen Dong, Li Tan, Michael A Held, Marcia J Kieliszewski

Open access · diamondAbstract read
In one paragraph

Article in Biochemistry insights, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Differential prolyl hydroxylation by six Physcomitrella prolyl-4 hydroxylases.Computational and structural biotechnology journal · 2024
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  5. Class III Peroxidases PRX01, PRX44, and PRX73 Control Root Hair Growth inInternational journal of molecular sciences · 2022
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  6. 3,4-Dehydro-L-proline Induces Programmed Cell Death in the Roots ofInternational journal of molecular sciences · 2021
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  7. Article
  8. Cracking the "Sugar Code": A Snapshot ofFrontiers in plant science · 2021
    Review
  9. Plant ProteinFrontiers in plant science · 2021
    Review
  10. Review
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  14. Review
  15. Article
  16. Article
  17. Separating Golgi Proteins fromThe Plant cell · 2019
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yuning ChenDepartment of Chemistry and Biochemistry, Ohio University, Athens, OH, USA.
Wen DongDepartment of Chemistry and Biochemistry, Ohio University, Athens, OH, USA.
Li TanComplex Carbohydrate Research Center, University of Georgia, Athens, GA, USA.
Michael A HeldDepartment of Chemistry and Biochemistry, Ohio University, Athens, OH, USA.
Marcia J KieliszewskiDepartment of Chemistry and Biochemistry, Ohio University, Athens, OH, USA.
Ohio University · USUniversity of Georgia · US

Funding

RENOVATION OF BIOCHEMISTRY LABORATORIESC06RR014575 · NCRR · OHIO UNIVERSITY ATHENS · PI FLEMMING, LESLIE A · 1999 to 1999
–
NCRR NIH HHS C06 RR014575
6 · The paper itself

Abstract

Extensins (EXTs) are hydroxyproline-rich glycoproteins (HRGPs) that are structural components of the plant primary cell wall. They are basic proteins and are highly glycosylated with carbohydrate accounting for >50% of their dry weight. Carbohydrate occurs as monogalactosyl serine and arabinosyl hydroxyproline, with arabinosides ranging in size from ~1 to 4 or 5 residues. Proposed functions of EXT arabinosylation include stabilizing the polyproline II helix structure and facilitating EXT cross-linking. Here, the involvement of arabinosylation in EXT cross-linking was investigated by assaying the initial cross-linking rate and degree of cross-linking of partially or fully de-arabinosylated EXTs using an in vitro cross-linking assay followed by gel permeation chromatography. Our results indicate that EXT arabinosylation is required for EXT cross-linking in vitro and the fourth arabinosyl residue in the tetraarabinoside chain, which is uniquely α-linked, may determine the initial cross-linking rate. Our results also confirm the conserved structure of the oligoarabinosides across species, indicating an evolutionary significance for EXT arabinosylation.

Indexed as

arabinosylationextensinHRGPin vitro cross-linkingperoxidaseRSHtomato P1

Identifiers

PMID26568683
PMCPMC4629521
OpenAlexW1912031838

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.