Evidence map›Paper›PMID 26568477›Full record

ArticleMolecular microbiology2016

Characterisation of worldwide Helicobacter pylori strains reveals genetic conservation and essentiality of serine protease HtrA.

Nicole Tegtmeyer, Yoshan Moodley, Yoshio Yamaoka, Sandy Ramona Pernitzsch, Vanessa Schmidt, Francisco Rivas Traverso, Thomas P Schmidt, Roland Rad, Khay Guan Yeoh, Ho Bow and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 2 pooled it
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 2 syntheses or guidelines pooled it, 76 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  13. Clinical Pathogenesis, Molecular Mechanisms of Gastric Cancer Development.Current topics in microbiology and immunology · 2023
    Article
  14. Pathogenomics of Helicobacter pylori.Current topics in microbiology and immunology · 2023
    Review
  15. Article
  16. Helicobacter pylori: an up-to-date overview on the virulence and pathogenesis mechanisms.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Review
  17. Article
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  19. Cortactin Promotes Effective AGS Cell Scattering byPathogens (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 11 institutions in 8 countries.

Nicole TegtmeyerLehrstuhl für Mikrobiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany.
Yoshan MoodleyDepartment of Zoology, University of Venda, Private Bag X5050, Thohoyandou, 0950, South Africa.
Yoshio YamaokaMichael E. DeBakey Veterans Affairs Medical Center and Baylor College of Medicine, Dept. Medicine-Gastroenterology, Houston, TX, USA.
Sandy Ramona PernitzschResearch Center for Infectious Diseases (ZINF), University of Würzburg, Josef-Schneider-Str. 2/Bau D15, D-97080, Würzburg, Germany.
Vanessa SchmidtLehrstuhl für Mikrobiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany.
Francisco Rivas TraversoInstitut für Medizinische Mikrobiologie, Otto-von-Guericke Universität Magdeburg, Leipziger Str. 44, D-39120, Magdeburg, Germany.
Thomas P SchmidtDepartment of Molecular Biology, Division of Microbiology, Paris-Lodron University of Salzburg, Billroth Str. 11, A-5020, Salzburg, Austria.
Roland RadII Medical Department, Klinikum Rechts der Isar, Technical University Munich, Munich, Germany.
Khay Guan YeohDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Ho BowDepartment of Microbiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
Javier TorresUnidad de Investigacion en Enfermedades Infecciosas, UMAE Pediatria, IMSS, Mexico City, Mexico.
Markus GerhardInstitut für Medizinische Mikrobiologie, Immunologie und Hygiene, Technische Universität München, Munich, 81675, Germany.
Gisbert SchneiderETH Zürich, Institut für Pharmazeutische Wissenschaften, Vladimir-Prelog-Weg 4, CH-8093, Zürich, Switzerland.
Silja WesslerDepartment of Molecular Biology, Division of Microbiology, Paris-Lodron University of Salzburg, Billroth Str. 11, A-5020, Salzburg, Austria.
Steffen BackertLehrstuhl für Mikrobiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstr. 5, D-91058, Erlangen, Germany.
Friedrich-Alexander-Universität Erlangen-Nürnberg · DENational University of Singapore · SGUniversity of Salzburg · ATETH Zurich · CHHeidelberg University · DEMexican Social Security Institute · MXMichael E. DeBakey VA Medical Center · USOtto-von-Guericke University Magdeburg · DETechnical University of Munich · DEUniversity of Venda · ZAUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HtrA proteases and chaperones exhibit important roles in periplasmic protein quality control and stress responses. The genetic inactivation of htrA has been described for many bacterial pathogens. However, in some cases such as the gastric pathogen Helicobacter pylori, HtrA is secreted where it cleaves the tumour-suppressor E-cadherin interfering with gastric disease development, but the generation of htrA mutants is still lacking. Here, we show that the htrA gene locus is highly conserved in worldwide strains. HtrA presence was confirmed in 992 H. pylori isolates in gastric biopsy material from infected patients. Differential RNA-sequencing (dRNA-seq) indicated that htrA is encoded in an operon with two subsequent genes, HP1020 and HP1021. Genetic mutagenesis and complementation studies revealed that HP1020 and HP1021, but not htrA, can be mutated. In addition, we demonstrate that suppression of HtrA proteolytic activity with a newly developed inhibitor is sufficient to effectively kill H. pylori, but not other bacteria. We show that Helicobacter htrA is an essential bifunctional gene with crucial intracellular and extracellular functions. Thus, we describe here the first microbe in which htrA is an indispensable gene, a situation unique in the bacterial kingdom. HtrA can therefore be considered a promising new target for anti-bacterial therapy.

Indexed as

Bacterial ProteinsBase SequenceCadherinsEvolution, MolecularGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicGene Knockout TechniquesGenes, BacterialGenes, EssentialGenetic VariationHelicobacter pyloriHumansMolecular Sequence DataOperonPeriplasmSequence Analysis, RNABacterial ProteinsCadherinsSerine Endopeptidases

Identifiers

PMID26568477
PMCPMC4832355
OpenAlexW2259375781

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.