Evidence map›Paper›PMID 26568381›Full record

ArticleNature communications2015

Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.

Annemarie Horn, Janosch Hennig, Yasar L Ahmed, Gunter Stier, Klemens Wild, Michael Sattler, Irmgard Sinning

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  4. Review
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  8. Review
  9. Article
  10. Review
  11. Chloroplast SRP43 acts as a chaperone for glutamyl-tRNA reductase, the rate-limiting enzyme in tetrapyrrole biosynthesis.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Article
  14. Conformational dynamics of a membrane protein chaperone enables spatially regulated substrate capture and release.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Annemarie HornHeidelberg University Biochemistry Center (BZH), INF 328, Heidelberg D-69120, Germany.
Janosch HennigCenter for Integrated Protein Science Munich at Biomolecular NMR Spectroscopy, Department Chemie, Technische Universität München, Lichtenbergstrasse 4, Garching DE-85747, Germany.
Yasar L AhmedHeidelberg University Biochemistry Center (BZH), INF 328, Heidelberg D-69120, Germany.ORCID http://orcid.org/0000-0002-4364-1372
Gunter StierHeidelberg University Biochemistry Center (BZH), INF 328, Heidelberg D-69120, Germany.
Klemens WildHeidelberg University Biochemistry Center (BZH), INF 328, Heidelberg D-69120, Germany.
Michael SattlerCenter for Integrated Protein Science Munich at Biomolecular NMR Spectroscopy, Department Chemie, Technische Universität München, Lichtenbergstrasse 4, Garching DE-85747, Germany.
Irmgard SinningHeidelberg University Biochemistry Center (BZH), INF 328, Heidelberg D-69120, Germany.
Heidelberg University · DECenter for Integrated Protein Science Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Canonical membrane protein biogenesis requires co-translational delivery of ribosome-associated proteins to the Sec translocase and depends on the signal recognition particle (SRP) and its receptor (SR). In contrast, high-throughput delivery of abundant light-harvesting chlorophyll a,b-binding proteins (LHCPs) in chloroplasts to the Alb3 insertase occurs post-translationally via a soluble transit complex including the cpSRP43/cpSRP54 heterodimer (cpSRP). Here we describe the molecular mechanisms of tethering cpSRP to the Alb3 insertase by specific interaction of cpSRP43 chromodomain 3 with a linear motif in the Alb3 C-terminal tail. Combining NMR spectroscopy, X-ray crystallography and biochemical analyses, we dissect the structural basis for selectivity of chromodomains 2 and 3 for their respective ligands cpSRP54 and Alb3, respectively. Negative cooperativity in ligand binding can be explained by dynamics in the chromodomain interface. Our study provides a model for membrane recruitment of the transit complex and may serve as a prototype for a functional gain by the tandem arrangement of chromodomains.

Indexed as

ArabidopsisAmino Acid MotifsArabidopsis ProteinsChlorophyll Binding ProteinsCrystallizationCrystallography, X-RayGTP-Binding ProteinsLight-Harvesting Protein ComplexesNuclear Magnetic Resonance, BiomolecularScattering, Small AngleSignal Recognition ParticleALBINO 3 protein, ArabidopsisArabidopsis ProteinsChlorophyll Binding ProteinscpSRP43 protein, ArabidopsisGTP-Binding ProteinsLight-Harvesting Protein ComplexesSignal Recognition ParticleSrp54-2 protein, ArabidopsisSrp54-3 protein, ArabidopsisSRP54A protein, Arabidopsis

Identifiers

PMID26568381
PMCPMC4660199
OpenAlexW2337006043

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.