Evidence map›Paper›PMID 26567337›Full record

ArticleThe Journal of biological chemistry2016

Developmental Stage-dependent Regulation of Prolyl 3-Hydroxylation in Tendon Type I Collagen.

Yuki Taga, Masashi Kusubata, Kiyoko Ogawa-Goto, Shunji Hattori

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. The Impact of Ageing on Fibrillar Collagens.Sub-cellular biochemistry · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yuki TagaFrom the Nippi Research Institute of Biomatrix, Toride, Ibaraki 302-0017, Japan y-taga@nippi-inc.co.jp.ORCID http://orcid.org/0000-0001-9100-758X
Masashi KusubataFrom the Nippi Research Institute of Biomatrix, Toride, Ibaraki 302-0017, Japan.
Kiyoko Ogawa-GotoFrom the Nippi Research Institute of Biomatrix, Toride, Ibaraki 302-0017, Japan.
Shunji HattoriFrom the Nippi Research Institute of Biomatrix, Toride, Ibaraki 302-0017, Japan.
Japan Institute of Leather Research · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

3-Hydroxyproline (3-Hyp), which is unique to collagen, is a fairly rare post-translational modification. Recent studies have suggested a function of prolyl 3-hydroxylation in fibril assembly and its relationships with certain disorders, including recessive osteogenesis imperfecta and high myopia. However, no direct evidence for the physiological and pathological roles of 3-Hyp has been presented. In this study, we first estimated the overall alterations in prolyl hydroxylation in collagens purified from skin, bone, and tail tendon of 0.5-18-month-old rats by LC-MS analysis with stable isotope-labeled collagen, which was recently developed as an internal standard for highly accurate collagen analyses. 3-Hyp was found to significantly increase in tendon collagen until 3 months after birth and then remain constant, whereas increased prolyl 3-hydroxylation was not observed in skin and bone collagen. Site-specific analysis further revealed that 3-Hyp was increased in tendon type I collagen in a specific sequence region, including a previously known modification site at Pro(707) and newly identified sites at Pro(716) and Pro(719), at the early ages. The site-specific alterations in prolyl 3-hydroxylation with aging were also observed in bovine Achilles tendon. We postulate that significant increases in 3-Hyp at the consecutive modification sites are correlated with tissue development in tendon. The present findings suggest that prolyl 3-hydroxylation incrementally regulates collagen fibril diameter in tendon.

Indexed as

AgingAmino Acid SequenceAnimalsBone and BonesCattleCollagen Type IHydroxylationHydroxyprolineMaleMolecular Sequence DataPeptidesProtein Processing, Post-TranslationalRats, Sprague-DawleySkinTendons3-hydroxyprolineCollagen Type IHydroxyprolinePeptides3-hydroxyprolinecollagendevelopmentmass spectrometry (MS)post-translational modification (PTM)tendon

Identifiers

PMID26567337
PMCPMC4705402
OpenAlexW2180623216

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.